DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and Klhl1

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001381602.1 Gene:Klhl1 / 290426 RGDID:1307452 Length:750 Species:Rattus norvegicus


Alignment Length:633 Identity:257/633 - (40%)
Similarity:379/633 - (59%) Gaps:47/633 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DLPGSGSTAQPRD-------------AAVTGTGGNSTAGGGSSVGSTAVDRPPSPARLSHTSEK- 53
            |.||      |:|             :::..||    .|.|..:.:|.....|.....|.:||: 
  Rat   136 DFPG------PQDKGLALKELQAEPASSIQATG----EGCGHRLTTTNHSLTPQSDLDSSSSEEF 190

  Fly    54 -----HPKVTLTELNMLRRHRELCDVVLNVGGRKIFAHRVILSACSSYFCAMFTGELEESRQTEV 113
                 |.:.:..::....:.::||||:|.||.|||.|||::||:.|.||.||||.::.|::|.|:
  Rat   191 YQAVHHAEQSFRKMENYLKQQQLCDVILIVGNRKIPAHRLVLSSVSDYFAAMFTSDVCEAKQEEI 255

  Fly   114 TIRDIDENAMELLIDFCYTAHIIVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPTNCLGIR 178
            .:..||.||:..|:.|.||..:.::|..::.||.|||||||.::.::||.||.:.|.|:||||||
  Rat   256 KMEGIDPNALWDLVQFAYTGCLELKEDTIENLLAAACLLQLPQVVEVCCHFLMKLLHPSNCLGIR 320

  Fly   179 AFADTHSCRELLRIADKFTQHNFQEVMESEEFLLLPVGQLVDIICSDELNVRSEEQVFNAVMSWL 243
            ||||...|.||:::|..:|..|..||:.::||||||..:|..::.||::||..||.:|:|:|.|:
  Rat   321 AFADAQGCIELMKVAHSYTMENIMEVIRNQEFLLLPAEELHKLLASDDVNVPDEETIFHALMMWV 385

  Fly   244 KYNVAERRQHLAQVLQHVRLPLLSPKFLVGTVGSDL----LVRSDEACRDLVDEAKNYLLLPQER 304
            ||::..|...|:.:|..:|||||.|:.|     :||    |.::|..|:.|:.||..|.|||:.|
  Rat   386 KYDMQRRCGDLSMLLAFIRLPLLPPQIL-----ADLENHALFKNDLECQKLILEAMKYHLLPERR 445

  Fly   305 PLMQGPRTRPRKPTRRGEVLFAVGGWCSGDAIASVERFDPQTNDWKMVAPMSKRRCGVGVAVLND 369
            .|||.|||:|||.|  ...|:||||..:.....::|::|.:||.|.....|:.||...||||::|
  Rat   446 TLMQSPRTKPRKST--VGTLYAVGGMDNNKGATTIEKYDLRTNLWIQAGMMNGRRLQFGVAVIDD 508

  Fly   370 LLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHV 434
            .|:.:||.||...||::|.|:|:|..|:. :.|.::.|..:||.||:|.:|||||.||...||.|
  Rat   509 KLFVIGGRDGLKTLNTVECYNPKTKTWTV-LPPMSTHRHGLGVTVLEGPIYAVGGHDGWSYLNTV 572

  Fly   435 ERYDPKENKWSKVAPMTTRRLGVAVAVLGGFLYAIGGSDGQCPLNTVERYDPRHNKWVAVSPMST 499
            ||:||:..:|:.||.|:..|..|.||.|.|.||::||.||...|:::|.|||..|||...:||..
  Rat   573 ERWDPQSQQWTYVASMSIARSTVGVAALNGKLYSVGGRDGSSCLSSMEYYDPHTNKWSMCAPMCK 637

  Fly   500 RRKHLGCAVFNNYIYAVGGRD-----DCME-LSSAERYNPLTNTWSPIVAMTSRRSGVGLAVVNG 558
            ||..:|.|..:.::|||||.|     .|.. |...|||:|.|:||:.:..::..|..||:.::..
  Rat   638 RRGGVGVATCDGFLYAVGGHDAPASNHCSRLLDYVERYDPKTDTWTMVAPLSMPRDAVGVCLLGD 702

  Fly   559 QLYAVGGFDGSAYLKTIEVYDPETNQWRLCGCMNYRRLGGGVGVMRAP 606
            :||||||:||..||.|:|.|||:||:|.....:|..|.|..|.|::.|
  Rat   703 RLYAVGGYDGQTYLNTMESYDPQTNEWTQMASLNIGRAGACVVVIKQP 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558 54/132 (41%)
PHA03098 69..587 CDD:222983 236/527 (45%)
KELCH repeat 359..403 CDD:276965 18/43 (42%)
KELCH repeat 407..451 CDD:276965 23/43 (53%)
KELCH repeat 454..497 CDD:276965 20/42 (48%)
KELCH repeat 501..545 CDD:276965 18/49 (37%)
KELCH repeat 548..593 CDD:276965 21/44 (48%)
Klhl1NP_001381602.1 PHA03098 208..730 CDD:222983 235/529 (44%)
KELCH repeat 498..541 CDD:276965 18/43 (42%)
KELCH repeat 545..589 CDD:276965 23/43 (53%)
KELCH repeat 592..635 CDD:276965 20/42 (48%)
KELCH repeat 639..689 CDD:276965 18/49 (37%)
KELCH repeat 692..736 CDD:276965 21/43 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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