DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and AT4G19330

DIOPT Version :10

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001319995.1 Gene:AT4G19330 / 28720147 AraportID:AT4G19330 Length:383 Species:Arabidopsis thaliana


Alignment Length:282 Identity:59/282 - (20%)
Similarity:86/282 - (30%) Gaps:95/282 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   386 IERYDPQ-TNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSKVAP 449
            |:.||.| ...|:.|                            ::|..|          |  :.|
plant   104 IKPYDHQPLTHWTID----------------------------IKCTGH----------W--LLP 128

  Fly   450 MT---TRRLGVAVAVLGGFLYAIGGSDGQCPLNTVERYDPRHNKWVAVSPMSTRRKHLGCAVFNN 511
            |.   :|.|.:....:|...|.|||.: ..|...|..||....|......|...||:....|.:.
plant   129 MPSPYSRCLQIVHETVGSETYEIGGQN-MTPSTDVWVYDKLIGKQRKAPSMMVARKNAFTCVLDG 192

  Fly   512 YIYAVGGRDDCMELSSAERYNPLTNTWS--PIVAMTSRRSGV-GLAVVNGQLYAVGGFDGSAYL- 572
            .:|.:||.:.......||.::|.|.||.  |...:..|.|.| .:....|::|.........|| 
plant   193 KLYVMGGCEADESTHWAEVFDPKTQTWEALPDPGVELRYSSVKNIQTKQGKVYVRSNKKNFVYLI 257

  Fly   573 --------------KTIEV--------------YDPETNQWRL----CGCMNYRRLGGGVG---- 601
                          .|.|:              ||.:..:|||    .|...|.:....:|    
plant   258 KECMWEVAEENLGESTCEIENVCYCYSNKRYWWYDAKCEEWRLVKGVSGLYEYYKTDSEIGNYGG 322

  Fly   602 ---------VMRAPQTENYMWC 614
                     |.|...|:. :||
plant   323 KLVVFWDRAVSRLTATKE-IWC 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558
PHA03098 69..587 CDD:222983 49/236 (21%)
KELCH repeat 359..403 CDD:276965 6/17 (35%)
KELCH repeat 407..451 CDD:276965 4/43 (9%)
KELCH repeat 454..497 CDD:276965 11/42 (26%)
KELCH repeat 501..545 CDD:276965 13/45 (29%)
KELCH repeat 548..593 CDD:276965 14/78 (18%)
AT4G19330NP_001319995.1 F-box_AtAFR-like 34..70 CDD:438923
NanM <157..>246 CDD:442289 23/88 (26%)
KELCH repeat 182..224 CDD:276965 12/41 (29%)
Blue background indicates that the domain is not in the aligned region.

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