DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and Klhl12

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_038946329.1 Gene:Klhl12 / 266772 RGDID:628717 Length:592 Species:Rattus norvegicus


Alignment Length:562 Identity:244/562 - (43%)
Similarity:348/562 - (61%) Gaps:14/562 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 HPKVTLTELNMLRRHRELCDVVLNVGGRKIFAHRVILSACSSYFCAMFTGE-------LEESRQT 111
            |.|..|..:|.||:...||||.|.|..:...|||::|:|||.|||||||.|       |.|..:.
  Rat    32 HAKSILNSMNSLRKSNTLCDVTLRVEQKDFPAHRIVLAACSDYFCAMFTSEVNASLCYLSEKGKP 96

  Fly   112 EVTIRDIDENAMELLIDFCYTAHIIVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPTNCLG 176
            .|.|:.:..:.||:|:||.||..:.|...|||.||||||||||..::..|||||:.||||:||||
  Rat    97 YVDIQGLTASTMEILLDFVYTETVHVTVENVQELLPAACLLQLKGVKQACCEFLESQLDPSNCLG 161

  Fly   177 IRAFADTHSCRELLRIADKFTQHNFQEVMESEEFLLLPVGQLVDIICSDELNVRSEEQVFNAVMS 241
            ||.||:||:|.:|::.|:.|:|.:|.||::.|||:||..|::..:|..||:.|.|||.||.||::
  Rat   162 IRDFAETHNCVDLMQAAEVFSQKHFPEVVQHEEFILLSQGEVEKLIKCDEIQVDSEEPVFEAVIN 226

  Fly   242 WLKYNVAERRQHLAQVLQHVRLPLLSPKFLVGTVGSDLLVRSDEACRDLVDEAKNYLLLPQERPL 306
            |:|:...||.:.|..:||:||:|||:|:::...:.::..:|....|||||||||.:.|.|:.|..
  Rat   227 WVKHAKKEREESLPDLLQYVRMPLLTPRYITDVIDAEPFIRCSLQCRDLVDEAKKFHLRPELRSQ 291

  Fly   307 MQGPRTRPRKPTRRGEVLFAVGGWCSGDA-IASVERFDPQTNDWKMVAPMSKRRCGVGVAVLNDL 370
            |||||||.|  ....|||..|||:.|..: |..||::||:|.:|..:..::::|..|....|:|.
  Rat   292 MQGPRTRAR--LGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDR 354

  Fly   371 LYAVGGHDGQSYLNSIERYDPQTNQ---WSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLN 432
            :|.:||:||:|.|:|:|..|...::   | ..|||....|...|...|...:|..||.||.:...
  Rat   355 IYVIGGYDGRSRLSSVECLDYTADEDGVW-YSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHT 418

  Fly   433 HVERYDPKENKWSKVAPMTTRRLGVAVAVLGGFLYAIGGSDGQCPLNTVERYDPRHNKWVAVSPM 497
            .:|||||..::||.:..|.|.|.|..:.|..|.:|.:||.||...||:||:|||....|..|:||
  Rat   419 SMERYDPNIDQWSMLGDMQTAREGAGLVVASGIIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPM 483

  Fly   498 STRRKHLGCAVFNNYIYAVGGRDDCMELSSAERYNPLTNTWSPIVAMTSRRSGVGLAVVNGQLYA 562
            :|:|...|.|:.|::||.|||.|....|||.|.||..|::|:.:.:||:.|..||..|:.|:|||
  Rat   484 ATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYA 548

  Fly   563 VGGFDGSAYLKTIEVYDPETNQWRLCGCMNYRRLGGGVGVMR 604
            :.|:||::.|.:||.|||..:.|.:...|..:|...||.|:|
  Rat   549 IAGYDGNSLLSSIECYDPIIDSWEVVASMGTQRCDAGVCVLR 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558 63/128 (49%)
PHA03098 69..587 CDD:222983 232/528 (44%)
KELCH repeat 359..403 CDD:276965 17/46 (37%)
KELCH repeat 407..451 CDD:276965 15/43 (35%)
KELCH repeat 454..497 CDD:276965 18/42 (43%)
KELCH repeat 501..545 CDD:276965 18/43 (42%)
KELCH repeat 548..593 CDD:276965 19/44 (43%)
Klhl12XP_038946329.1 BTB_POZ_KLHL12_C3IP1_DKIR 29..159 CDD:349551 61/126 (48%)
PHA03098 63..574 CDD:222983 226/513 (44%)
BACK_KLHL12 154..289 CDD:350527 63/134 (47%)
KELCH repeat 298..339 CDD:276965 16/42 (38%)
KELCH repeat 343..389 CDD:276965 17/46 (37%)
KELCH repeat 393..436 CDD:276965 15/42 (36%)
KELCH repeat 440..483 CDD:276965 18/42 (43%)
KELCH repeat 487..531 CDD:276965 18/43 (42%)
KELCH repeat 534..579 CDD:276965 19/44 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59391
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.830

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