DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dbo and Klhl4

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_766369.2 Gene:Klhl4 / 237010 MGIID:2442829 Length:717 Species:Mus musculus


Alignment Length:612 Identity:248/612 - (40%)
Similarity:360/612 - (58%) Gaps:18/612 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GDLPGSGSTAQPRDAAVTGTGGNSTAGGGSSVGSTAVDRPPSPARLS---HTSEKHPKVTLTELN 63
            |:|.......:.||..:.|.........|     ..|:.|......|   :.|..|...||.::.
Mouse   113 GNLLKEACEKRSRDLEMMGDDNIEDMRAG-----PCVEEPEQMTTSSNDHYRSRSHADYTLCKME 172

  Fly    64 MLRRHRELCDVVLNVGGRKIFAHRVILSACSSYFCAMFTGELEESRQTEVTIRDIDENAMELLID 128
            ...:.|:||||:|..|..||.|||::|||.|.||.||||.::.|:||.||.|..:|.||:..|:.
Mouse   173 SYLKERKLCDVLLIAGPLKIPAHRLVLSAVSDYFAAMFTNDVLEARQEEVKIEGVDPNALNSLVQ 237

  Fly   129 FCYTAHIIVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPTNCLGIRAFADTHSCRELLRIA 193
            :.||..:.:.|..::.||.|||||||.::.|:||.||.:||.|:||||||:|.|...|.||..:|
Mouse   238 YAYTGVLQLREDTIENLLSAACLLQLTQVIDVCCNFLIKQLHPSNCLGIRSFGDAQGCMELQNVA 302

  Fly   194 DKFTQHNFQEVMESEEFLLLPVGQLVDIICSDELNVRSEEQVFNAVMSWLKYNVAERRQHLAQVL 258
            .|:...:|.:|::::||||||..::..::|||::||..||.:|:|:|.|:.::...|::.||::|
Mouse   303 HKYAMEHFIDVIKNQEFLLLPANEISKLLCSDDINVPDEETIFHALMQWVGHDAQARQRDLAKLL 367

  Fly   259 QHVRLPLLSPKFLVGTVGSDLLVRSDEACRDLVDEAKNYLLLPQERPLMQGPRTRPRKPTRRGEV 323
            .::|||||||:.|.....|.....:.| |:.|:.||..|.|||:.|.::|.|||:|||.|  ...
Mouse   368 SYIRLPLLSPQLLADLENSSFFSGNLE-CQKLLMEAMKYHLLPERRSMLQSPRTKPRKST--VGA 429

  Fly   324 LFAVGGWCSGDAIASVERFDPQTNDWKMVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIER 388
            |:||||..:.....::|::|.:||.|..:..||.||...||||:::.||.|||.||...||::|.
Mouse   430 LYAVGGMDAAKGTTTIEKYDLRTNSWIHIGTMSGRRLQFGVAVVDNKLYVVGGRDGLKTLNTVEC 494

  Fly   389 YDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSKVAPMTTR 453
            ::|.|..|.. :.|.::.|..:|||.|:|.:|||||.||...||.|||:||...:|:.||.|:|.
Mouse   495 FNPVTKTWVV-MPPMSTHRHGLGVATLEGPMYAVGGHDGWSYLNTVERWDPDGRQWNYVASMSTP 558

  Fly   454 RLGVAVAVLGGFLYAIGGSDGQCPLNTVERYDPRHNKWVAVSPMSTRRKHLGCAVFNNYIYAVGG 518
            |..|.|..|...||||||.||...|.::|.:||..|||...:|||.||..:|.|..|.|:|.|||
Mouse   559 RSTVGVVALNNRLYAIGGRDGSSCLKSMEFFDPHTNKWSLCAPMSKRRGGVGVATHNGYLYVVGG 623

  Fly   519 RD-----DCMELSS-AERYNPLTNTWSPIVAMTSRRSGVGLAVVNGQLYAVGGFDGSAYLKTIEV 577
            .|     .|..||. .|||:|..::||.:..::..|..|.:..:..:||.|||:||..||.|:|.
Mouse   624 HDAPAPNHCSRLSDCVERYDPKGDSWSTVAPLSVPRDAVAVCPLGDKLYVVGGYDGHTYLNTVES 688

  Fly   578 YDPETNQWRLCGCMNYRRLGGGVGVMR 604
            ||.:.::|:....:|..|.|..|.|::
Mouse   689 YDAQKDEWKEEVPVNIGRAGACVVVVK 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558 58/126 (46%)
PHA03098 69..587 CDD:222983 230/523 (44%)
KELCH repeat 359..403 CDD:276965 18/43 (42%)
KELCH repeat 407..451 CDD:276965 23/43 (53%)
KELCH repeat 454..497 CDD:276965 19/42 (45%)
KELCH repeat 501..545 CDD:276965 19/49 (39%)
KELCH repeat 548..593 CDD:276965 16/44 (36%)
Klhl4NP_766369.2 BTB 171..275 CDD:279045 48/103 (47%)
PHA03098 175..697 CDD:222983 229/525 (44%)
BACK 283..382 CDD:285009 43/98 (44%)
Kelch 430..475 CDD:128874 18/44 (41%)
Kelch_1 464..509 CDD:279660 20/45 (44%)
KELCH repeat 465..508 CDD:276965 18/43 (42%)
KELCH repeat 512..556 CDD:276965 23/43 (53%)
Kelch 525..569 CDD:128874 23/43 (53%)
KELCH repeat 559..602 CDD:276965 19/42 (45%)
Kelch 570..616 CDD:128874 22/45 (49%)
Kelch_1 605..656 CDD:279660 20/50 (40%)
KELCH repeat 606..657 CDD:276965 19/50 (38%)
KELCH repeat 659..698 CDD:276965 16/38 (42%)
Kelch 670..714 CDD:128874 18/43 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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