DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dbo and Ipp

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_032415.2 Gene:Ipp / 16351 MGIID:96581 Length:584 Species:Mus musculus


Alignment Length:585 Identity:215/585 - (36%)
Similarity:322/585 - (55%) Gaps:30/585 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PSPARLSHTSEKHPKVTLTELNMLRRHRELCDVVLNVGGRKIFAHRVILSACSSYFCAMFTGELE 106
            |..|..|.:|:||.::.|.::|.:|..:..|||.|.||......||::|:|.|.||.|:|||.::
Mouse     7 PKAADNSFSSDKHAQLILAQMNKMRSGQHFCDVQLQVGKETFQVHRLVLAASSPYFAALFTGGMK 71

  Fly   107 ESRQTEVTIRDIDENAMELLIDFCYTAHIIVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDP 171
            ||.:..|.|..::....:||:||.||..:.:..:|||.|:.||.:|||.|:.::||:|||.|:||
Mouse    72 ESSKDVVQILGVEAGIFQLLLDFIYTGVVNIAVTNVQELIVAADMLQLTEVVNLCCDFLKGQIDP 136

  Fly   172 TNCLGIRAFADTHSCRELLRIADKFTQHNFQEVMESEEFLLLPVGQLVDIICSDELNVRSEEQVF 236
            .||:|:..|::..:|.:||...:.:...:|.||...||||.|...||:.|:.|:||::..|.|||
Mouse   137 QNCIGLFQFSEQIACHDLLEFTENYIHVHFLEVHTGEEFLGLTKDQLIKILRSEELSIEDEYQVF 201

  Fly   237 NAVMSWLKYNVAERRQHLAQVLQHVRLPLLSP----KFLVGTVGSDLLVRSDEACRDLVDEAKNY 297
            .|.|.|:..::.:||:|:.:||..||.|||..    |::.|....:|.|......::..:..|: 
Mouse   202 LAAMQWILKDLGKRRKHVVEVLDPVRFPLLPSQRLLKYIEGVSDFNLRVALQTLLKEYCEVCKS- 265

  Fly   298 LLLPQER---PLMQGPRTRPRKPTRRGEVLFAVGG--------WCSGDAIASVERFDPQTNDWKM 351
               |:|.   ..:|..:.||||..|:  .|:||||        |....|::.|||||..:..|..
Mouse   266 ---PKENKFCSFLQTSKVRPRKKARK--YLYAVGGYTRLQGGRWSDSRALSCVERFDTFSQYWTT 325

  Fly   352 VAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLD 416
            |:.:.:.|||:||||:..::||:||.......:..|.|||.|.||: .||.....|..:||.|..
Mouse   326 VSSLHQARCGLGVAVVGGMVYAIGGEKDSMIFDCTECYDPVTKQWT-TVASMNHPRCGLGVCVCY 389

  Fly   417 GFLYAVGGQDGVQCLNHVERYDPKENKWSKVAPMTTRRLGVAVAVLGGFLYAIGG-SDGQCPLNT 480
            |.:||:||..|.:..|.:||:||.||||..|..|...|.......:.|.:||:|| |:....|.:
Mouse   390 GAIYALGGWVGAEIGNTIERFDPDENKWEVVGSMAVSRYYFGCCEMQGLIYAVGGISNEGLELRS 454

  Fly   481 VERYDPRHNKWVAVSPMSTRRKHLGCAVFNNYIYAVGGRDDCME-LSSAERYNPLTNTWSPIVAM 544
            .|.|||...:|..:.||.|||.:||.|..|:.|||:||.::..: |.:.|:|:.....|..:.:|
Mouse   455 FEVYDPLSKRWSPLPPMGTRRAYLGVAALNDCIYAIGGWNETQDALHTVEKYSFEEEKWVEVASM 519

  Fly   545 TSRRSGVGLAVVNGQLYAVGG------FDGSAYLKTIEVYDPETNQWRLCGCMNYRRLGGGVGVM 603
            ...|:|:....|||.||..||      |.....|.::|||:|.::.|...|.|...|..|||.|:
Mouse   520 KVPRAGMCAVTVNGLLYVSGGRSSSHDFLAPGTLDSVEVYNPHSDTWTEIGNMITSRCEGGVAVL 584

  Fly   604  603
            Mouse   585  584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558 53/126 (42%)
PHA03098 69..587 CDD:222983 199/540 (37%)
KELCH repeat 359..403 CDD:276965 20/43 (47%)
KELCH repeat 407..451 CDD:276965 20/43 (47%)
KELCH repeat 454..497 CDD:276965 13/43 (30%)
KELCH repeat 501..545 CDD:276965 14/44 (32%)
KELCH repeat 548..593 CDD:276965 18/50 (36%)
IppNP_032415.2 BTB 27..131 CDD:279045 42/103 (41%)
PHA03098 34..575 CDD:222983 201/547 (37%)
BACK 139..241 CDD:285009 38/101 (38%)
Kelch 290..343 CDD:128874 21/52 (40%)
Kelch 1 296..343 16/46 (35%)
KELCH repeat 333..376 CDD:276965 20/43 (47%)
Kelch 2 344..390 17/46 (37%)
Kelch 345..390 CDD:128874 17/45 (38%)
KELCH repeat 380..424 CDD:276965 20/43 (47%)
Kelch 3 391..437 17/45 (38%)
Kelch 392..437 CDD:128874 17/44 (39%)
KELCH repeat 427..473 CDD:276965 15/45 (33%)
Kelch 438..485 CDD:128874 19/46 (41%)
Kelch 4 439..485 19/45 (42%)
KELCH repeat 475..520 CDD:276965 14/44 (32%)
Kelch 486..533 CDD:128874 13/46 (28%)
Kelch 5 487..533 13/45 (29%)
KELCH repeat 523..574 CDD:276965 18/50 (36%)
Kelch 534..584 CDD:128874 17/49 (35%)
Kelch 6 535..583 17/47 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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