DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and Klhl41

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_476539.1 Gene:Klhl41 / 117537 RGDID:620852 Length:606 Species:Rattus norvegicus


Alignment Length:586 Identity:158/586 - (26%)
Similarity:261/586 - (44%) Gaps:58/586 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LNMLRRHRELCDVVLNVGGRKIFAHRVILSACSSYFCAMFTGELEESRQTEVTIRDIDENAMELL 126
            |..|...::..|..|..|.:....||:||||||.||...|..|:||.::.|:.:.::|...::|:
  Rat    23 LKDLLEEKKFIDCTLKAGDKSFPCHRLILSACSPYFREYFLSEIEEEKKKEMALDNVDPAILDLI 87

  Fly   127 IDFCYTAHIIVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPTNCLGIRAFADTHSCRELLR 191
            |.:.|:|.|.:.:.|||.:...:...|:..:..:|..:|:::|.|.|||.|........|..|..
  Rat    88 IKYLYSASIDLNDGNVQDIFALSSRFQIPSVFTVCVSYLQKRLAPGNCLAILRLGLLLDCPRLAI 152

  Fly   192 IADKFTQHNFQEVMESEEFLLLPVGQLVDIICSDELNVRSEEQVFNAVMSWLKYNVAERRQHLAQ 256
            .|.:|....|.::.:.|:|:.|...:|:.:|.:|.|||..||.||.|||.|::.:...|.::|::
  Rat   153 SAREFVSDRFVQICKEEDFMQLSPQELISVISNDSLNVEKEEVVFEAVMKWVRTDKENRAKNLSE 217

  Fly   257 VLQHVRLPLLSPKFLVGTVGSDLLVRSDEACRDLVDEAKNYLLLPQERPLMQGPRTRPRKPTRR- 320
            |...:|..|::.|:....|..|.:::|:...:..:...|:         ...|....|.|...: 
  Rat   218 VFDCIRFRLMAEKYFKDHVEKDDIIKSNPEVQKKIKVLKD---------AFAGKLPEPSKSAEKG 273

  Fly   321 --GEVLFAVG---------------GWCSGDAIASVE-----RFDPQTNDWKMVAPMSK-RRCGV 362
              |||...||               |....|.|..|.     .:||..|:..:.|...: .|...
  Rat   274 GTGEVNGDVGDEDLLPGYLNDIPRHGMFVKDLILLVNDTAAVAYDPMENECYLTALAEQIPRNHS 338

  Fly   363 GVAVLNDLLYAVGG--HDGQSYLNSIERY----DPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYA 421
            .:....:.:|.|||  .|.::....::.|    |..:::| ..:.|..|.|...|:..:|..:|.
  Rat   339 SIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEW-VGLPPLPSARCLFGLGEVDDKIYV 402

  Fly   422 VGGQDGVQ---CLNHVERYDPKENKWSKVAPMTTRRLGVAVAVLGGFLYAIGG--SDGQCPLNTV 481
            |.|:| :|   .|:.|..|||...|||:|..:..:..|..|....|.:|.:||  .|.:| .|.|
  Rat   403 VAGKD-LQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKC-TNRV 465

  Fly   482 ERYDPRHNKWVAVSPMSTRRKHLGCAVFNNYIYAVGGRDDCMELSSAERYNPLTNTWSPIVAMTS 546
            ..|:|:...|..::||.|.|...|.|:....|...||..:....:|.|.::..||.|..:.....
  Rat   466 FIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQ 530

  Fly   547 RRSGVGLAVVNGQLYAVGGF-----DGSAYLKT----IEVYDPETNQWRLCGCMNYRRLGGGVGV 602
            .||.:.|..:.|.|||:|||     :...:..|    |..|:.:..:|  .|.:...|...|...
  Rat   531 ERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW--AGMLKEIRYASGASC 593

  Fly   603 M 603
            :
  Rat   594 L 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558 36/113 (32%)
PHA03098 69..587 CDD:222983 153/561 (27%)
KELCH repeat 359..403 CDD:276965 9/49 (18%)
KELCH repeat 407..451 CDD:276965 17/46 (37%)
KELCH repeat 454..497 CDD:276965 13/44 (30%)
KELCH repeat 501..545 CDD:276965 11/43 (26%)
KELCH repeat 548..593 CDD:276965 15/53 (28%)
Klhl41NP_476539.1 BTB 23..127 CDD:279045 31/103 (30%)
PHA03098 39..578 CDD:222983 150/550 (27%)
BACK 147..237 CDD:285009 28/89 (31%)
KELCH repeat 335..384 CDD:276965 9/49 (18%)
Kelch 346..398 CDD:128874 12/52 (23%)
Kelch 1 346..398 12/52 (23%)
Kelch_1 387..434 CDD:279660 17/47 (36%)
KELCH repeat 388..433 CDD:276965 17/45 (38%)
Kelch 2 399..447 16/48 (33%)
KELCH repeat 437..482 CDD:276965 14/45 (31%)
Kelch_6 439..485 CDD:290672 16/46 (35%)
Kelch 3 448..495 16/47 (34%)
Kelch_1 484..529 CDD:279660 11/44 (25%)
KELCH repeat 485..530 CDD:276965 11/44 (25%)
Kelch 4 497..542 11/44 (25%)
Kelch 5 544..599 13/53 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X9
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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