DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and klhl28

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_017952205.1 Gene:klhl28 / 100493680 XenbaseID:XB-GENE-994648 Length:573 Species:Xenopus tropicalis


Alignment Length:577 Identity:239/577 - (41%)
Similarity:343/577 - (59%) Gaps:23/577 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 VDRPPSPARLSHTSEKHPKVTLTELNMLRRHRELCDVVLNVGGRKIFAHRVILSACSSYFCAMFT 102
            :|:......|::.:..|.:..|..||:||:|.||||:||.||..||.||:|:|::.|.||.||||
 Frog     3 MDQSSQSYMLANLTHLHSEQLLQGLNLLRQHHELCDIVLQVGDVKIHAHKVVLASISPYFKAMFT 67

  Fly   103 GELEESRQTEVTIRDIDENAMELLIDFCYTAHIIVEESNVQTLLPAACLLQLVEIQDICCEFLKR 167
            |.|.|...::|..:.:||.|::.:|::.||..:.:.:..|::|||||.|||:..:...||.||:.
 Frog    68 GNLSEKENSQVEFQSVDEAALQAIIEYAYTGTVFISQETVESLLPAANLLQIKLVLKECCAFLES 132

  Fly   168 QLDPTNCLGIRAFADTHSCRELLRIADKFTQHNFQEVMESEEFLLLPVGQLVDIICSDELNVRSE 232
            |||..||:||..||:|:.|.||...|:|:...||::|.::|||..|...:|.:|:.:|.|||.:|
 Frog   133 QLDVGNCIGISRFAETYGCHELYLAANKYICQNFEDVCQTEEFFELSNSELHEIVSNDCLNVVNE 197

  Fly   233 EQVFNAVMSWLKYNVAERRQHLAQVLQHVRLPLLSPKFLVGTVGSDLLVRSDEACRDLVDEAKNY 297
            |.||.|:.||:||:|.||:::|||:|..|||||||.|||.....::.|:|.|..|:.|::||..|
 Frog   198 ETVFYALESWIKYDVQERQKYLAQLLHCVRLPLLSVKFLTRLYEANHLIRDDHTCKHLLNEALKY 262

  Fly   298 LLLPQER-----PLMQGPRTRPRKPTRRGEVLFAVGGWCSGDA-IASVERFDPQTNDWKMVAPMS 356
            ..:|:.|     .|...||..|:       ||.||||.....| :.|:|.:.||.:.|..:||:.
 Frog   263 HFMPEHRLSHQTVLKTQPRCAPK-------VLCAVGGKAGLFACLESMEMYFPQDDSWIGLAPLG 320

  Fly   357 KRRCGVGVAVLNDLLYAVGG-----HDGQSYL---NSIERYDPQTNQWSCDVAPTTSCRTSVGVA 413
            ..|...|:..|:..:|.|||     ..|.:|.   ||:|.:||.||:|: .:.....||:::|..
 Frog   321 SPRYEFGLCTLDQKVYVVGGIATHMRQGINYRKHENSVECWDPVTNKWT-SIERMIECRSTLGAV 384

  Fly   414 VLDGFLYAVGGQDGVQCLNHVERYDPKENKWSKVAPMTTRRLGVAVAVLGGFLYAIGGSDGQCPL 478
            ||.|.:||:||.||..||..||:|.||..:|..||||...|...|.|||.|.:|||||. |...:
 Frog   385 VLAGEMYALGGYDGQSCLQSVEKYIPKAKEWHPVAPMIKTRSCFAGAVLDGMIYAIGGY-GPAHM 448

  Fly   479 NTVERYDPRHNKWVAVSPMSTRRKHLGCAVFNNYIYAVGGRDDCMELSSAERYNPLTNTWSPIVA 543
            |:||||||..:.|..|:.|..:|.:.|.:|...:|:.|||.:....|||.|||:|..|.|:....
 Frog   449 NSVERYDPSRDSWEMVASMEDKRINFGVSVMLGFIFVVGGHNGVAHLSSIERYDPHQNQWTVCRP 513

  Fly   544 MTSRRSGVGLAVVNGQLYAVGGFDGSAYLKTIEVYDPETNQWRLCGCMNYRRLGGGV 600
            |...|:|||.|||:..||.|||..||:||..::.|||.::.|:....|.|.|...|:
 Frog   514 MKEPRTGVGAAVVDNYLYVVGGHSGSSYLNYVQKYDPISDTWQDVAGMAYSRCNFGL 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558 56/126 (44%)
PHA03098 69..587 CDD:222983 226/531 (43%)
KELCH repeat 359..403 CDD:276965 17/51 (33%)
KELCH repeat 407..451 CDD:276965 22/43 (51%)
KELCH repeat 454..497 CDD:276965 21/42 (50%)
KELCH repeat 501..545 CDD:276965 16/43 (37%)
KELCH repeat 548..593 CDD:276965 21/44 (48%)
klhl28XP_017952205.1 PHA03098 37..555 CDD:222983 223/526 (42%)
KELCH repeat 323..374 CDD:276965 17/51 (33%)
KELCH repeat 378..421 CDD:276965 21/42 (50%)
KELCH repeat 425..467 CDD:276965 21/42 (50%)
KELCH repeat 471..515 CDD:276965 16/43 (37%)
KELCH repeat 518..561 CDD:276965 20/42 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59391
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

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