DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dbo and klhl17

DIOPT Version :10

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_004916201.1 Gene:klhl17 / 100491332 XenbaseID:XB-GENE-977875 Length:627 Species:Xenopus tropicalis


Alignment Length:560 Identity:281/560 - (50%)
Similarity:372/560 - (66%) Gaps:7/560 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LSHTSEKHPKVTLTELNMLRRHRELCDVVLNVGGRKIFAHRVILSACSSYFCAMFTGELEESRQT 111
            :||.|::|.......:|.:|:...|||:||:||.::|..|:|:|::||.||.||||.|:.|||||
 Frog    52 ISHNSKRHYHDAFVCMNRMRQRGLLCDIVLHVGTKEIKGHKVVLASCSPYFHAMFTNEMSESRQT 116

  Fly   112 EVTIRDIDENAMELLIDFCYTAHIIVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPTNCLG 176
            .||:.|||..|:|.|:.:.|||.|:|.|.|||||||||.||||..::|.||:||..||||:||||
 Frog   117 HVTLHDIDPQALEQLVQYAYTAEIVVGEGNVQTLLPAASLLQLNGVRDACCKFLLSQLDPSNCLG 181

  Fly   177 IRAFADTHSCRELLRIADKFTQHNFQEVMESEEFLLLPVGQLVDIICSDELNVRSEEQVFNAVMS 241
            ||.|||||||.:||:.|.|:...:|.||.::|||:|||:.|::|:|.||.|||.|||:|:.||::
 Frog   182 IRGFADTHSCSDLLKSAHKYVLQHFVEVSKTEEFMLLPLKQVLDLISSDSLNVPSEEEVYRAVLN 246

  Fly   242 WLKYNVAERRQHLAQVLQHVRLPLLSPKFLVGTVGSDLLVRSDEACRDLVDEAKNYLLLPQERPL 306
            |:|::|..||||:.::::.|||||||..||:.:|.::||||....|:||:.||..|.|:|::|.:
 Frog   247 WVKHDVDGRRQHVPRLMKCVRLPLLSRDFLMSSVDTELLVRHHSECKDLLIEALKYHLMPEQRGV 311

  Fly   307 MQGPRTRPRKPTRRGEVLFAVGGWCSGDAIA---SVERFDPQTNDWKMVAPMSKRRCGVGVAVLN 368
            :...|||||:......|||||||   |...|   ..|.:|.:|:.|.||..||.||..||||.:.
 Frog   312 LSNSRTRPRRCEGASTVLFAVGG---GSLFAIHGDCEAYDTRTDRWHMVTSMSTRRARVGVAAIG 373

  Fly   369 DLLYAVGGHDGQSYLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNH 433
            :.||||||:||.|.|.::|.|||.||.|..:|:..|. |:.:|||||.|.|||.||.||..|||.
 Frog   374 NKLYAVGGYDGTSDLATVESYDPVTNTWQPEVSMGTR-RSCLGVAVLHGLLYAAGGYDGASCLNS 437

  Fly   434 VERYDPKENKWSKVAPMTTRRLGVAVAVLGGFLYAIGGSDGQCPLNTVERYDPRHNKWVAVSPMS 498
            .|||||....|:.:|.|:|||..|.||.|.|.|||:||.|....|.|||:|:|:.|.|..::.|.
 Frog   438 AERYDPLTGTWTSIAAMSTRRRYVRVATLDGNLYAVGGYDSSSHLATVEKYEPQINTWTPIANML 502

  Fly   499 TRRKHLGCAVFNNYIYAVGGRDDCMELSSAERYNPLTNTWSPIVAMTSRRSGVGLAVVNGQLYAV 563
            :||...|.||....:|..||.|....|:|.|||||..|||..:..|..|||...|..::|.||||
 Frog   503 SRRSSAGVAVLEGMLYVAGGNDGTSCLNSVERYNPKANTWESVAPMNIRRSTHDLVAMDGWLYAV 567

  Fly   564 GGFDGSAYLKTIEVYDPETNQWRLCGCMNYRRLGGGVGVM 603
            ||.|||:.|.:||.|:|.||:|....||..||...||.|:
 Frog   568 GGNDGSSSLNSIEKYNPRTNKWVAASCMFTRRSSVGVAVL 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558 68/126 (54%)
PHA03098 69..587 CDD:222983 268/520 (52%)
KELCH repeat 359..403 CDD:276965 23/43 (53%)
KELCH repeat 407..451 CDD:276965 24/43 (56%)
KELCH repeat 454..497 CDD:276965 20/42 (48%)
KELCH repeat 501..545 CDD:276965 18/43 (42%)
KELCH repeat 548..593 CDD:276965 23/44 (52%)
klhl17XP_004916201.1 BTB_POZ_KLHL17_actinfilin 38..176 CDD:349555 65/123 (53%)
PHA03098 77..543 CDD:222983 243/469 (52%)
KELCH repeat 321..360 CDD:276965 15/41 (37%)
KELCH repeat 364..407 CDD:276965 23/42 (55%)
KELCH repeat 411..454 CDD:276965 24/42 (57%)
KELCH repeat 458..502 CDD:276965 20/43 (47%)
KELCH repeat 505..549 CDD:276965 18/43 (42%)
KELCH repeat 552..597 CDD:276965 23/44 (52%)
Kelch 564..608 CDD:128874 24/44 (55%)

Return to query results.
Submit another query.