DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and kbtbd3

DIOPT Version :10

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_002934972.1 Gene:kbtbd3 / 100490420 XenbaseID:XB-GENE-6044137 Length:607 Species:Xenopus tropicalis


Alignment Length:635 Identity:148/635 - (23%)
Similarity:247/635 - (38%) Gaps:138/635 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PRDAAVTGTGGNSTAGGGSSVGSTAVDRPPSPARLSHTSEKHPKVTLTELNMLRRHRELCDVVLN 77
            |||          :.|.|...|...|.:     ::|..||.|.:..|:.|...|..:...|..:.
 Frog     4 PRD----------SFGRGVCNGFPYVQK-----KISIVSECHGQQILSILQNFRDQKAFFDFNII 53

  Fly    78 VGGRKIFAHRVILSACSSYFCAMFTGELEESRQTEVTIRDIDENAMELLIDFCYTAHIIVEESNV 142
            |..:.:..||.:|:|.|.:|.|||...::|.....|||.::..||:...:|:.||....:.:.||
 Frog    54 VKDQLMPCHRCVLAASSDFFRAMFEVNMKERDGGSVTISNLSSNAVAAFLDYAYTGKAEITDENV 118

  Fly   143 QTLLPAACLLQLVEIQDICCEFLKRQLDPTNCLGIRAFADTHSCRELLRIADKFTQHNFQEVMES 207
            ..|...:..||:..:...|.:||.:.:|..|||.:.:.::::....|...|.:|:..:|..:.:|
 Frog   119 DMLFQMSSFLQVPLLSKACSDFLIKIIDTNNCLQLLSISESYGSTRLFDHALEFSLQHFSLLTQS 183

  Fly   208 EEFLLLPVGQLVDIICSDELNVRSEEQVFNAVMSWLKYNVAERRQHLAQVLQHVRLPLLSPKFLV 272
            .:||.|.:|.|...:..|.|||..||....||::|.|:::.:|.:...::|:.:||..||...|.
 Frog   184 TDFLELNIGVLEKCLEDDLLNVPEEESALVAVIAWTKHSLDKRERFFPRLLRTIRLHQLSQSTLQ 248

  Fly   273 GT-VGSDLLVRSDEACRDLVDEAKNYLLLPQERPLMQGPRTRPRKPTRRGEVLFAVGGWCSGDAI 336
            .. :..|.|::|.: |...::.|                       .:|.|   |.||......:
 Frog   249 NVLISEDQLLKSTD-CLSTINSA-----------------------IKRVE---AAGGLFPDARL 286

  Fly   337 ASVER------------------FDPQTNDWKMVAPMSKRRC-GVGVAVLNDLLYAVGGHDGQS- 381
            ::.|:                  ::.:|:.|..:..:..... |..::...:.::..||..|.. 
 Frog   287 STTEKYIFVHKTAEDGGTQCTFCYNLKTDKWLELPHIQLTDLPGSSLSSYGEKIFITGGCKGHCC 351

  Fly   382 ---YLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENK 443
               .|:..|.|...|:|..|                                      |.|..|.
 Frog   352 RGVRLHIAEPYHDATDQTWC--------------------------------------YCPASNN 378

  Fly   444 WSKVAPM-TTRRLGVAVAVLGGFLYAIGGSDGQC----PLNTVERYDPRHNKWVAVSPMSTRRKH 503
            .|.|..| ..|.:..:|..|.. |:.|||.....    .|..||.|:|...:|.:|||:.....:
 Frog   379 SSLVPAMKKPRTMHTSVMALNQ-LFVIGGKTKGAHYIKSLLDVESYNPLAKEWKSVSPLPRGIYY 442

  Fly   504 LGCAVFNNYIYAVGGRDDCMELSSA--------ERYNPLTNTWSPIVAMTSR---RSGVGLAVVN 557
            ...:...|.||.:|..   :|::.|        .:||..||.|..:||...:   .:.:....||
 Frog   443 PEASACKNVIYVLGSE---VEITDAFNPSLDCFFKYNAETNQWCELVAEFGQFFHATLIKAVPVN 504

  Fly   558 GQLYAVGGFDGSAYLKTIEVYD--PETNQWRLCG---CMNYRRLGGGVGV 602
            ..||...       |.|.:||.  |||..|:..|   |..:.  .|.||:
 Frog   505 NTLYICD-------LSTYKVYSFCPETCVWKGEGSFECAGFN--AGAVGI 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558 37/126 (29%)
PHA03098 69..587 CDD:222983 129/559 (23%)
KELCH repeat 359..403 CDD:276965 10/48 (21%)
KELCH repeat 407..451 CDD:276965 6/44 (14%)
KELCH repeat 454..497 CDD:276965 14/46 (30%)
KELCH repeat 501..545 CDD:276965 13/51 (25%)
KELCH repeat 548..593 CDD:276965 14/49 (29%)
kbtbd3XP_002934972.1 BTB_POZ_KBTBD3_BKLHD3 24..153 CDD:349580 39/128 (30%)
PHA03098 62..582 CDD:222983 132/562 (23%)
KELCH repeat 330..385 CDD:276965 15/92 (16%)
KELCH repeat 389..437 CDD:276965 16/48 (33%)
KELCH repeat 440..485 CDD:276965 11/47 (23%)
KELCH repeat 537..582 CDD:276965 3/11 (27%)

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