DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and klhl18

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001123404.1 Gene:klhl18 / 100170176 XenbaseID:XB-GENE-5759414 Length:578 Species:Xenopus tropicalis


Alignment Length:544 Identity:240/544 - (44%)
Similarity:335/544 - (61%) Gaps:9/544 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LRRHRELCDVVLNVGGRKIFAHRVILSACSSYFCAMFTGELEESRQTEVTIRDIDENAMELLIDF 129
            :||..:||||.|.||..|..|||::|:|...||.||||.::.|.:|.|:.::.:|.:|:|.||:|
 Frog    30 IRRQGKLCDVTLRVGEHKFSAHRIVLAASIPYFHAMFTNDMVECKQDEIVMQGMDASALEALINF 94

  Fly   130 CYTAHIIVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPTNCLGIRAFADTHSCRELLRIAD 194
            .|..|:.:::.|||:||..|..|||..|:|.||.|||.:|.|.||||:|.||:|..|..|...::
 Frog    95 AYNGHLAIDQQNVQSLLMGASFLQLQNIKDACCTFLKERLHPKNCLGVRQFAETMMCAVLHDASN 159

  Fly   195 KFTQHNFQEVMESEEFLLLPVGQLVDIICSDELNVRSEEQVFNAVMSWLKYNVAERRQHLAQVLQ 259
            :|...:|.||..|||||.|...::::::..|||||::|||||.|.::|::|:..:|...|.::|.
 Frog   160 RFIHEHFVEVSMSEEFLALAFEEVLELVSRDELNVKAEEQVFEAALAWVRYDREKREVFLPELLS 224

  Fly   260 HVRLPLLSPKFLVGTVGSDLLVRSDEACRDLVDEAKNYLLLPQERPLMQGPRTRPRKPTRRGEVL 324
            .:||||..|:||...|..|.|||....|||||||||:|.|:|:.||.:...:||||..|....::
 Frog   225 KIRLPLCRPQFLTDRVQQDDLVRCCHKCRDLVDEAKDYHLMPERRPHLLAFKTRPRCCTSIAGLI 289

  Fly   325 FAVGG------WCSGDAIASVERFDPQTNDWKMVAPMSKRRCGVGVAVLNDLLYAVGGHDGQSYL 383
            :||||      :.:||::..||.|||..|.|:...||:..|..|||||:|.||||:||:||||.|
 Frog   290 YAVGGLNSAANFYAGDSLNVVEVFDPIANRWEKCQPMTTARSRVGVAVVNGLLYAIGGYDGQSRL 354

  Fly   384 NSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSKVA 448
            :::|.|:|.|:.|: .|....|.|:::|..||||.:|..||.||...||.||.|.|:.:||:.|.
 Frog   355 STVEVYNPDTDTWT-KVGSMNSKRSAMGTVVLDGQIYVCGGYDGNCSLNSVEAYSPETDKWTVVT 418

  Fly   449 PMTTRRLGVAVAVLGGFLYAIGGSDGQCPLNTVERYDPRHNKWVAVSPMSTRRKHLGCAVFNNYI 513
            ||::.|....|.|..|.:|..||.||....||||.|:.....|..|:.|..:|...|.|...:.:
 Frog   419 PMSSNRSAAGVTVFEGRIYVSGGHDGLQIFNTVEYYNHHTATWHPVASMMNKRCRHGAASLGSKM 483

  Fly   514 YAVGGRDDCMELSSAERYNPLTNTWSPIVAMTSRRSGVGLAVVNGQLYAVGGFDGSAYLKTIEVY 578
            |..||.:....||.||.||.:.:.|..|..|.:|||.|.|....|:||||||:||.:.|.::|:|
 Frog   484 YICGGYEGSAFLSVAEVYNSMADQWYLITPMNTRRSRVSLVANCGRLYAVGGYDGQSNLNSVEMY 548

  Fly   579 DPETNQWRLCGCMNYRRLGGGVGV 602
            |||||:|.....|....  |||||
 Frog   549 DPETNRWTFMAPMVCHE--GGVGV 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558 52/110 (47%)
PHA03098 69..587 CDD:222983 232/523 (44%)
KELCH repeat 359..403 CDD:276965 24/43 (56%)
KELCH repeat 407..451 CDD:276965 21/43 (49%)
KELCH repeat 454..497 CDD:276965 16/42 (38%)
KELCH repeat 501..545 CDD:276965 14/43 (33%)
KELCH repeat 548..593 CDD:276965 23/44 (52%)
klhl18NP_001123404.1 BTB_POZ_KLHL18 18..133 CDD:349556 48/102 (47%)
PHA03098 33..556 CDD:222983 231/523 (44%)
BACK_KLHL18 134..240 CDD:350532 45/105 (43%)
KELCH repeat 281..326 CDD:276965 14/44 (32%)
KELCH repeat 330..373 CDD:276965 24/43 (56%)
KELCH repeat 377..421 CDD:276965 21/43 (49%)
KELCH repeat 424..468 CDD:276965 16/43 (37%)
KELCH repeat 471..515 CDD:276965 14/43 (33%)
KELCH repeat 518..561 CDD:276965 22/42 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 1 1.000 - - FOG0000036
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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