DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and si:rp71-68n21.9

DIOPT Version :10

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_021334567.1 Gene:si:rp71-68n21.9 / 100151173 ZFINID:ZDB-GENE-081105-100 Length:686 Species:Danio rerio


Alignment Length:578 Identity:172/578 - (29%)
Similarity:272/578 - (47%) Gaps:38/578 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 PPSPARLSHTSEKHPKVTLTELNMLRRHRELCDVVLNVG-GRKIF-AHRVILSACSSYFCAMFTG 103
            ||.|......|.:|....|..|:..|....||||.|..| ..:.| .||||:::.|.||.|||||
Zfish    73 PPKPQIQVFNSTEHGADILKGLDHFRGDETLCDVTLVPGDSSETFPVHRVIMASASDYFKAMFTG 137

  Fly   104 ELEESRQTEVTIRDIDENAMELLIDFCYTAHIIVEESNVQTLLPAACLLQLVEIQDICCEFLKRQ 168
            .:.|....|:.:..:....::.:|.|.||:.:.:....:|..|.||..||::.:.:.|.:.|..:
Zfish   138 GMREQELKEIKLHGVSTVGLKNIIVFIYTSQLSLSLGTLQDTLEAASFLQVLPVLNFCNQLLSSE 202

  Fly   169 LDPTNCLGIRAFADTHSCRELLRIADKFTQHNFQEVMESEEFLLLPVGQLVDIICSDELNVRSEE 233
            :...||:.:...|......::.:....|...||..:|:|...|.|....:...:.|:.|...||.
Zfish   203 ITIENCVEVERIAKDLLLEDVQKHIHTFVCENFSMLMQSGRLLQLSEASMTFALSSNSLRGLSEM 267

  Fly   234 QVFNAVMSWLKYNVAERRQHLAQVLQHVRLPLLSPKFLVGTVGSD---------------LLVRS 283
            :::....:||.:...|||.....:::|:|.||:||..|:.....|               ..:||
Zfish   268 ELYRIARAWLSHKPNERRSAAYSLMRHIRFPLMSPAELLQISQEDQTEEGAASKRKEEGEAFMRS 332

  Fly   284 DEACRDLVDEAKNYLLLPQERPLMQGPRTRPRKPTRRGEVLFAVGGWCSGDAIASVERFDPQTND 348
            |.||.:|:.||.||.:||..:|.:|..||:.|.....   |..:||......:.|.|......:|
Zfish   333 DTACVNLLLEASNYQMLPFLQPALQTERTKIRSDCTH---LVVLGGVMRQQLVVSKELKLYNKDD 394

  Fly   349 ---WKMVAPMSKRRCGVGVAVLNDLLYAVGGHD-----GQSYLNSIERYDPQTNQWSCDVAPTTS 405
               |:.:.||...|...|||:|...||.|||..     |::.::|..||||:.::| ..||....
Zfish   395 GGSWRALQPMEVPRYQHGVALLGGFLYIVGGQSTYDTKGKTAVDSAYRYDPRFDRW-LQVASLNE 458

  Fly   406 CRTSVGVAVLDGFLYAVGGQDGVQCLNHVERYDPKENKWSKVAPMTTRRLGVAVAVLGGFLYAIG 470
            .||...::.|.|.||||||::....::.||.|:..:|:|:.||||:....|.|..|.||.:|..|
Zfish   459 KRTFFHLSALKGKLYAVGGRNATGEIDSVECYNLNKNEWTLVAPMSEPHYGHAGTVHGGLMYVSG 523

  Fly   471 GSDGQCPLNTVERYDPRHNKWV-AVSPMSTRRKHLGCAVFNNYIYAVGGR-----DDCMELSSAE 529
            |.........:..|:|..:.|. ....|..|..|..|.| ...:|.:||.     :|..::.|.|
Zfish   524 GITRDAFQKELLCYNPDRDVWSRRADMMELRGLHCMCTV-GERLYVMGGNHFRGTNDYDDVLSCE 587

  Fly   530 RYNPLTNTWSPIVAMTSRRSGVGLAVVNGQLYAVGGF--DGSAYLKTIEVYDPETNQW 585
            .|:|..:.|:.:..|...:|.||:||...::|.|||:  :....:..::.||||.::|
Zfish   588 FYSPDADQWTMVAPMPRGQSDVGVAVFEERIYVVGGYSWNSRCMVDIVQCYDPEKDEW 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558 40/128 (31%)
PHA03098 69..587 CDD:222983 164/550 (30%)
KELCH repeat 359..403 CDD:276965 19/48 (40%)
KELCH repeat 407..451 CDD:276965 18/43 (42%)
KELCH repeat 454..497 CDD:276965 11/43 (26%)
KELCH repeat 501..545 CDD:276965 12/48 (25%)
KELCH repeat 548..593 CDD:276965 14/40 (35%)
si:rp71-68n21.9XP_021334567.1 BTB_POZ 81..208 CDD:453885 38/126 (30%)
BACK 203..298 CDD:475122 21/94 (22%)
NanM 396..662 CDD:442289 81/252 (32%)
KELCH repeat 408..456 CDD:276965 19/48 (40%)
KELCH repeat 460..504 CDD:276965 18/43 (42%)
KELCH repeat 507..552 CDD:276965 11/44 (25%)
KELCH repeat 554..603 CDD:276965 13/49 (27%)
KELCH repeat 606..646 CDD:276965 14/40 (35%)

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