DRSC/TRiP Functional Genomics Resources

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Protein Alignment dbo and klhl41a

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_001922967.1 Gene:klhl41a / 100148315 ZFINID:ZDB-GENE-081105-22 Length:599 Species:Danio rerio


Alignment Length:580 Identity:155/580 - (26%)
Similarity:259/580 - (44%) Gaps:59/580 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LNMLRRHRELCDVVLNVGGRKIFAHRVILSACSSYFCAMF---TGELEESRQTEVTIRDIDENAM 123
            |..|.:..:..|.:|.||.|.:..||:|::|||.||..::   .|..::....||.:.::|.|.|
Zfish    22 LKELLKENKFVDCILKVGDRSLPCHRLIMAACSPYFRELYFTEDGTEKKDANKEVVLENVDPNIM 86

  Fly   124 ELLIDFCYTAHIIVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPTNCLGIRAFADTHSCRE 188
            ::::::.|:|.|.:.:.|||.:...|...|:..:..:|..:|:.:|...|||.|.......:|..
Zfish    87 DMIVNYLYSADIDITDDNVQDVFAVANKFQIPSVFTVCVNYLQNKLSLGNCLAIFRMGLVLNCPR 151

  Fly   189 LLRIADKFTQHNFQEVMESEEFLLLPVGQLVDIICSDELNVRSEEQVFNAVMSWLKYNVAERRQH 253
            |...|..|...:|:.:.:.||||.....:...||..|.|||..||.||..:|.|::.|...|.:.
Zfish   152 LAVSARDFIAEHFETLSKDEEFLEFNAPEFFAIIGCDALNVEKEELVFELLMKWVRKNKENRAKA 216

  Fly   254 LAQVLQHVRLPLLSPKFLVGTVGSDLLVRSDEACRDLVDEAKNYLLLPQERPLMQGPRTRPRKPT 318
            |....:|:|..||..|:|...|..|.::::|.   :|:.:.|..      :....|...:.::..
Zfish   217 LGDAFEHIRFRLLPEKYLKEKVEKDDIIKADP---ELIKKLKVI------KDAFAGKLPQIKEGE 272

  Fly   319 RRGEVLFAVGGWCSG---------DAIASVE-----RFDPQTNDWKMVAPMSKR--RCGVGVAVL 367
            :.||....:.|:.:.         |.|..:.     .:|...|:. .:|.|:::  |..|.:...
Zfish   273 KEGEGENELPGFLNDSQRLGMFNRDLILMINDTAAVAYDANENEC-FLAAMAEQIPRNHVSITSK 336

  Fly   368 NDLLYAVGG--HDGQSYLNSIERY----DPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQD 426
            .:|||..||  .|.::..:.::.|    ||.:..|.. :.|..|.|....:...:..|:||.|:|
Zfish   337 KNLLYVAGGLFVDEENKDSPLQCYFYQMDPHSPNWIA-LPPMPSPRCLFAMGEFENLLFAVAGKD 400

  Fly   427 --GVQCLNHVERYDPKENKWSKVAPMTTRRLGVAVAVLGGFLYAIGG-SDGQCPLNTVERYDPRH 488
              ..:.|:.|..||..:.||.:...:..|..|.:|....|.:|.||| :|....:|.:..|:.:.
Zfish   401 LQSNESLDSVLCYDVDKMKWLETKKLPLRIHGHSVISQNGLVYCIGGKTDENKTINKMFAYNHKK 465

  Fly   489 NKWVAVSPMSTRRKHLGCAVFNNYIYAVGGRDDCMELSSAERYNPLTNTWSPIVAMTSRRSGVGL 553
            ::|..::.|.|.|...|..|....|..|||.::...|||.|.|:..||.|.........||.|.:
Zfish   466 SEWKELAAMKTPRSMFGATVHKGKIVVVGGVNEDGLLSSCEAYDFGTNKWEVFAEFAQERSSVNV 530

  Fly   554 AVVNGQLYAVGGFD---------GSAYLKTIEVYDPETNQWRLCGCMNYRRLGGGVGVMR 604
            ..|:|.||||.||.         ..:.:..|..|:.:..||           .|.:|.||
Zfish   531 LSVDGVLYAVAGFTIKENEDKQCVPSEITDIWQYEEDKKQW-----------SGMIGEMR 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558 34/116 (29%)
PHA03098 69..587 CDD:222983 149/554 (27%)
KELCH repeat 359..403 CDD:276965 12/49 (24%)
KELCH repeat 407..451 CDD:276965 12/45 (27%)
KELCH repeat 454..497 CDD:276965 11/43 (26%)
KELCH repeat 501..545 CDD:276965 15/43 (35%)
KELCH repeat 548..593 CDD:276965 15/53 (28%)
klhl41aXP_001922967.1 BTB 22..129 CDD:279045 30/106 (28%)
PHA03098 46..521 CDD:222983 129/485 (27%)
BACK 137..239 CDD:285009 33/101 (33%)
KELCH repeat 328..377 CDD:276965 12/49 (24%)
Kelch 339..391 CDD:128874 13/52 (25%)
Kelch_1 380..420 CDD:279660 10/39 (26%)
Kelch_6 431..478 CDD:290672 13/46 (28%)
KELCH repeat 431..474 CDD:276965 11/42 (26%)
Kelch_1 477..520 CDD:279660 15/42 (36%)
KELCH repeat 478..522 CDD:276965 15/43 (35%)
KELCH repeat 525..578 CDD:276965 17/63 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4441
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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