DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dbo and ivns1abp

DIOPT Version :9

Sequence 1:NP_524989.2 Gene:dbo / 53556 FlyBaseID:FBgn0040230 Length:623 Species:Drosophila melanogaster
Sequence 2:XP_012816907.1 Gene:ivns1abp / 100145550 XenbaseID:XB-GENE-949332 Length:665 Species:Xenopus tropicalis


Alignment Length:673 Identity:193/673 - (28%)
Similarity:316/673 - (46%) Gaps:109/673 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SGSTAQPRDAAVT-GTGGNSTAGGGSSVGSTAVDRPPSPARLSHTSEKHPKVTLTELNMLRRHRE 70
            :|.|.|.||..|. ||.......|.                |:...|:..:.::.:||.||:..:
 Frog     9 AGLTLQCRDCGVAQGTHRKMVPNGS----------------LNFEDEQFIESSVAKLNALRKSGQ 57

  Fly    71 LCDVVLNVGGRKIFAHRVILSACSSYFCAMFTGELEESRQTEVTIRDIDENAMELLIDFCYTAHI 135
            .|||.|.|.|.::.|||.:|:.||.:...:|..:.|....:.|...|::.:|:|:|:::.||:.:
 Frog    58 FCDVKLQVCGHEMLAHRAVLACCSPFLFEIFNSDGESHGISLVRFDDLNPDAVEVLLNYAYTSQL 122

  Fly   136 IVEESNVQTLLPAACLLQLVEIQDICCEFLKRQLDPTNCLGIRAFADTHSCRELLRIADKFTQHN 200
            ..|...|:.:..||..|::..::.:|.::|..::|..:|:..|.|.:......||...|.:.|.:
 Frog   123 KAETDLVKDVYSAAKKLKIDRVKQVCGDYLLSKIDVQSCISYRNFVNAMGDWRLLSKIDNYIQEH 187

  Fly   201 FQEVMESEEFLLLPVGQLVDIICSDELNVRSEEQVFNAVMSWLKYNVAERRQHLAQVLQHVR--- 262
            ..|:.|.|:||.||...| :|:..:.:::.|..:::..|::|::.::.|..::|..:|:.|:   
 Frog   188 LLEISEQEDFLKLPRLNL-EIMLEENVSLPSNGKLYTKVINWVQRSIWENGENLDALLEEVQTLY 251

  Fly   263 -----------------------LPLL----------------------------SPKFLVGTVG 276
                                   :.|:                            |||.....:.
 Frog   252 YSADHKLLDASLLGEHTDAYEDNIQLIQKKSPRENNHKNLSSSSSGSLSPTALTQSPKHEWKIIA 316

  Fly   277 SDLLVRSDEACRDLVDEAKNYLLLPQERPLMQGPRTRPR---------KP-------------TR 319
            |:....:...|..:::.....:.|......:..|.:.||         :|             .|
 Frog   317 SEKKTNNTYLCLAVLNSMLCVIFLHGRNSPVNSPSSTPRLTKSLSLEIQPDDSLERVMSPMHYAR 381

  Fly   320 RG----EV---LFAVGGWCSGDAIASVERFDPQTNDWKMVAPMSKRRCGVGVAVLNDLLYAVGGH 377
            .|    |:   |.|.||:...:.:.:||.:||:|:.|..:|||...|....:|||.|.||.|||.
 Frog   382 SGLGTAELNGKLIAAGGYNREECLRTVECYDPETDIWTFIAPMKTPRARFQMAVLMDHLYVVGGS 446

  Fly   378 DGQS-YLNSIERYDPQTNQWSCDVAPTTSCRTSVGVAVLDGFLYAVGGQD--GVQCLNHVERYDP 439
            :|.| .|:..|:|||::|.| ..|....|.|.:.||..|:|.||.|||.|  |.:.|.:.:.:||
 Frog   447 NGHSDDLSCGEKYDPKSNVW-ISVPELRSNRCNAGVCALNGKLYVVGGSDPYGQKGLKNCDVFDP 510

  Fly   440 KENKWSKVAPMTTRRLGVAVAVLGGFLYAIGGSDGQCPLNTVERYDPRHNKWVAVSPMSTRRKHL 504
            ....|:..|.:..||...||..||..:|.|||::....||:||.|:|.::.|..|:||:..|:..
 Frog   511 ITRMWTCCAQLNIRRHQSAVCELGNKMYIIGGAESWNCLNSVECYNPENDTWTLVAPMNVARRGA 575

  Fly   505 GCAVFNNYIYAVGGRDDCMELSSAERYNPLTNTWSPIVAMTSRRSGVGLAVVNGQLYAVGGFDGS 569
            |.||:...::.|||.|....||..|.|:|..|.|..:.:|||.||..|:..|..|:||.|||||:
 Frog   576 GVAVYEGKLFVVGGFDGTHALSCVESYDPERNEWKMMGSMTSARSNAGMVAVGDQIYAAGGFDGN 640

  Fly   570 AYLKTIEVYDPETNQW----RLC 588
            .:|.|||||:|:|.:|    .||
 Frog   641 EFLNTIEVYNPQTEEWSPFTHLC 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dboNP_524989.2 BTB_POZ_KLHL20_KLEIP 49..176 CDD:349558 35/126 (28%)
PHA03098 69..587 CDD:222983 176/607 (29%)
KELCH repeat 359..403 CDD:276965 20/44 (45%)
KELCH repeat 407..451 CDD:276965 17/45 (38%)
KELCH repeat 454..497 CDD:276965 17/42 (40%)
KELCH repeat 501..545 CDD:276965 15/43 (35%)
KELCH repeat 548..593 CDD:276965 23/45 (51%)
ivns1abpXP_012816907.1 BTB_POZ_NS1BP 41..164 CDD:349615 34/122 (28%)
PHA03098 50..665 CDD:222983 181/616 (29%)
KELCH repeat 381..424 CDD:276965 14/42 (33%)
KELCH repeat 428..473 CDD:276965 20/45 (44%)
KELCH repeat 476..521 CDD:276965 17/44 (39%)
KELCH repeat 525..568 CDD:276965 17/42 (40%)
KELCH repeat 572..616 CDD:276965 15/43 (35%)
KELCH repeat 619..662 CDD:276965 21/42 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D312716at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X9
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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