DRSC/TRiP Functional Genomics Resources

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Protein Alignment krz and Arrb2

DIOPT Version :9

Sequence 1:NP_001247400.1 Gene:krz / 53554 FlyBaseID:FBgn0040206 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_037043.1 Gene:Arrb2 / 25388 RGDID:2157 Length:410 Species:Rattus norvegicus


Alignment Length:428 Identity:250/428 - (58%)
Similarity:315/428 - (73%) Gaps:30/428 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 RQATRVFKKSSSNGKITVYLGKRDFVDHVTHVDPIDGVVFIDPEYVKDRKVFGQVLAAFRYGRED 108
            :..||||||||.|.|:||||||||||||:..|||:||||.:||:|:||||||..:..||||||||
  Rat     4 KPGTRVFKKSSPNCKLTVYLGKRDFVDHLDKVDPVDGVVLVDPDYLKDRKVFVTLTCAFRYGRED 68

  Fly   109 LDVLGLTFRKDLYLAHEQIYPPM-QLDRPMTRLQERLIKKLGPNAHPFYFEVPPYCPASVSLQPA 172
            ||||||:|||||::|..|.:||| ...||.||||:||:||||.:||||:|.:|...|.||:|||.
  Rat    69 LDVLGLSFRKDLFIATYQAFPPMPNPPRPPTRLQDRLLKKLGQHAHPFFFTIPQNLPCSVTLQPG 133

  Fly   173 PGDVGKSCGVDYELKAFVGENVEDKPHKRNSVRLTIRKVMYAPSKVGEQPSIEVSKEFMMKPNK- 236
            |.|.||:||||:|::||..:::|:|.||||||||.||||.:||...|.|||.|.::.|:|...: 
  Rat   134 PEDTGKACGVDFEIRAFCAKSIEEKSHKRNSVRLIIRKVQFAPETPGPQPSAETTRHFLMSDRRS 198

  Fly   237 IHLEATLDKELYHHGEKISVNVHVANNSNRTVKKIKVCVRQFADICLFSTAQYKSVVAEIESEDG 301
            :||||:||||||:|||.::|||||.|||.:|||||:|.|||:||||||||||||..||::|.:| 
  Rat   199 LHLEASLDKELYYHGEPLNVNVHVTNNSAKTVKKIRVSVRQYADICLFSTAQYKCPVAQLEQDD- 262

  Fly   302 CQVAPGFTLSKVFELCPLLANNKDKWGLALDGQLKHEDTNLASSTLITNPAQRESLGIMVHYKVK 366
             ||:|..|..||:.:.|||::|::|.|||||||||||||||||||::...|.:|.|||:|.|:||
  Rat   263 -QVSPSSTFCKVYTITPLLSDNREKRGLALDGQLKHEDTNLASSTIVKEGANKEVLGILVSYRVK 326

  Fly   367 VKLLISSPLLNGDLVAELPFTLMHPKPEEEEHPLLGERSPRASLAGGGLPLVSMSDGETESATGG 431
            |||::|.   .||:..||||.||||||  .:|..|    ||                 .:||...
  Rat   327 VKLVVSR---GGDVSVELPFVLMHPKP--HDHITL----PR-----------------PQSAPRE 365

  Fly   432 QDVPTTTNLIQLDDDEAQDDDIIFEDFARLRLKGAETE 469
            .|:|..||||:.|.:.|.||||:|||||||||||.:.:
  Rat   366 IDIPVDTNLIEFDTNYATDDDIVFEDFARLRLKGMKDD 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
krzNP_001247400.1 Arrestin_N 59..214 CDD:419887 101/155 (65%)
Arrestin_C 233..393 CDD:214976 99/160 (62%)
Arrb2NP_037043.1 Arrestin_N 19..175 CDD:278754 101/155 (65%)
Arrestin_C 199..350 CDD:214976 99/155 (64%)
Interaction with TRAF6. /evidence=ECO:0000250 241..410 100/191 (52%)
Interaction with AP2B1 378..410 17/26 (65%)
[DE]-X(1,2)-F-X-X-[FL]-X-X-X-R motif. /evidence=ECO:0000250 386..396 8/9 (89%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353565
Domainoid 1 1.000 226 1.000 Domainoid score I2433
eggNOG 1 0.900 - - E1_KOG3865
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 495 1.000 Inparanoid score I1337
OMA 1 1.010 - - QHG52566
OrthoDB 1 1.010 - - D340461at33208
OrthoFinder 1 1.000 - - FOG0000854
OrthoInspector 1 1.000 - - otm45036
orthoMCL 1 0.900 - - OOG6_104809
Panther 1 1.100 - - LDO PTHR11792
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X758
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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