DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-21Ca and Clec4a3

DIOPT Version :10

Sequence 1:NP_652642.2 Gene:lectin-21Ca / 53552 FlyBaseID:FBgn0040107 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_694877.2 Gene:Clec4a3 / 73149 MGIID:1920399 Length:237 Species:Mus musculus


Alignment Length:258 Identity:60/258 - (23%)
Similarity:97/258 - (37%) Gaps:69/258 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 YISNNHKSHWNSANEVQVNETRKQLAKIEGQEKETNDK-----IKVIHDNVDNEFNALS------ 99
            |::.|.|:..:|::    .:|....|.   |.|.|:.|     .||:..::...|..|:      
Mouse     7 YVNTNFKNKVDSSD----IDTDSWPAP---QRKNTSQKSCHKFSKVLFTSLIIYFLLLTILFSGA 64

  Fly   100 --------AKIKNVKNIQRHLASLELQLQETKKALNLSVEAKKVMPKTEIPSQFQKIGWRHFFIE 156
                    :::...|.|.:.|...||:.  ||.|..|..:.....||     .::..|...:|..
Mouse    65 LITLFTKYSQLLEEKMIIKELNYTELEC--TKWASLLEDKVWSCCPK-----DWKPFGSYCYFTS 122

  Fly   157 KKHKVDWFKATSMCHKMGAHLLTIQSEDELDAIRTELKDI---------NDGSHDF-WLD---IN 208
            ......|.::...|..|||||:.|.|::|.|.| |.:.|.         |.|...: |:|   .:
Mouse   123 TDLVASWNESKENCFHMGAHLVVIHSQEEQDFI-TGILDTGTAYFIGLSNPGDQQWQWIDQTPYD 186

  Fly   209 DIAKWGEFISLATGMNPPFLKWHKHRPQVQIHQRCVHLR-----GGEMMDGKCSEQFLFICQL 266
            |              |..|  |||..|... :::||.:.     |....|..||::...||.:
Mouse   187 D--------------NTTF--WHKGEPSSD-NEQCVIINHRQSTGWGWSDIPCSDKQNSICHV 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CaNP_652642.2 CLECT 158..265 CDD:153057 32/124 (26%)
Clec4a3NP_694877.2 CLECT_DC-SIGN_like 107..230 CDD:153060 35/145 (24%)

Return to query results.
Submit another query.