DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-21Ca and Cd209e

DIOPT Version :10

Sequence 1:NP_652642.2 Gene:lectin-21Ca / 53552 FlyBaseID:FBgn0040107 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001178934.1 Gene:Cd209e / 501797 RGDID:1563333 Length:207 Species:Rattus norvegicus


Alignment Length:166 Identity:40/166 - (24%)
Similarity:73/166 - (43%) Gaps:25/166 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 ASLELQLQETKKALNLSVEAKKVMPKTEIPSQFQKI------GWRHF-----FIEKKHKVDWFKA 166
            :|.|:|.::||       :.|.....:::.|:...:      .|..|     |..|..: ||..:
  Rat    45 SSEEVQWEQTK-------QEKMYQDLSQLKSEIDSLCRLCPWDWTFFNGNCYFFSKSQR-DWHNS 101

  Fly   167 TSMCHKMGAHLLTIQSEDELDAIRTELKDINDGSHDFWLDINDIAKWGEFISLATGMNPPFLK-- 229
            .:.|.:|.|.|:||:|.:|    ::.|:..:..:...|:.::|:.|.||:..|........|:  
  Rat   102 ITACQEMEAQLVTIKSPEE----QSFLQQTSKKNGYTWMGLSDLNKEGEWYWLDGSPLSDSLRNY 162

  Fly   230 WHKHRPQVQIHQRCVHLRGGEMMDGKCSEQFLFICQ 265
            |::.:|.....|.||..|.....|.||.....:||:
  Rat   163 WNEGQPNNIDGQDCVEFRNDGWNDAKCDNWKFWICK 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CaNP_652642.2 CLECT 158..265 CDD:153057 28/108 (26%)
Cd209eNP_001178934.1 CLECT_DC-SIGN_like 77..199 CDD:153060 33/127 (26%)

Return to query results.
Submit another query.