DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-21Ca and Clec4a

DIOPT Version :9

Sequence 1:NP_652642.2 Gene:lectin-21Ca / 53552 FlyBaseID:FBgn0040107 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001005899.2 Gene:Clec4a / 474143 RGDID:1359662 Length:240 Species:Rattus norvegicus


Alignment Length:166 Identity:47/166 - (28%)
Similarity:64/166 - (38%) Gaps:37/166 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 TKKALNLSVEAKKVMPKTE-----IPSQFQKIGWRHFFIEKKH-----KVDWFKATSMCHKMGAH 176
            |.|.||.   .|.|:...|     .|..::..| .|.:...||     |..|.::...|..||||
  Rat    86 THKELNC---IKNVLLMEEKSWSCCPKNWKPFG-SHCYWVTKHTSTYSKASWNESEKNCFSMGAH 146

  Fly   177 LLTIQSEDELDAIRTELK-------DINDGSHDFWLDINDIAKWGEFISLATGMNPPFLKWHKHR 234
            ||.|.|::|.|.|...|.       .:.|..|..|          :::| .|..|.....|||..
  Rat   147 LLVIHSKEEQDFITGILNRDAAYFIGLWDSGHRQW----------QWVS-QTPYNASATFWHKGE 200

  Fly   235 PQVQIHQRCV---HLRGG-EMMDGKCSEQFLFICQL 266
            |... .::||   ||..| ...|..||.:...:||:
  Rat   201 PSSD-DEKCVIINHLNSGWGWNDIPCSGKQQSVCQM 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CaNP_652642.2 CLECT 158..265 CDD:153057 35/122 (29%)
Clec4aNP_001005899.2 ITIM motif 5..10
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 18..38
CLECT_DC-SIGN_like 107..235 CDD:153060 39/140 (28%)
Mannose binding. /evidence=ECO:0000250|UniProtKB:Q9UMR7 200..202 0/1 (0%)
N-acetyl-D-glucosamine binding. /evidence=ECO:0000250|UniProtKB:Q9UMR7 211..213 0/1 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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