DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-21Ca and Clec3a

DIOPT Version :9

Sequence 1:NP_652642.2 Gene:lectin-21Ca / 53552 FlyBaseID:FBgn0040107 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001102369.1 Gene:Clec3a / 365009 RGDID:1306295 Length:196 Species:Rattus norvegicus


Alignment Length:237 Identity:53/237 - (22%)
Similarity:95/237 - (40%) Gaps:52/237 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 VCLVELAPVLKYISNNHKSHWNSANEVQVNETRKQLAKIEGQEKETNDKIKVIHDNVDNEFNALS 99
            :|::..:.:|..||:     :.|..:.:.:..|:        .||.:..:|...:.:..|.|||.
  Rat     8 ICILVASLLLDQISS-----YPSRAKARKHSKRR--------VKEKDGDLKSQVEKLWREVNALK 59

  Fly   100 AKIKNVKNIQRHLASLELQLQETKKALNLSVEAKKVMPKTEIPSQFQKIGWRHFFIEKKHKVDWF 164
                            |:|..:|     :.:...||..|..:.|:    |.:|:          .
  Rat    60 ----------------EMQALQT-----VCLRGTKVHKKCYLASE----GLKHY----------H 89

  Fly   165 KATSMCHKMGAHLLTIQSEDELDAIRTELKDINDGSHDFWLDINDIAKWGEFISLATGMNPPFLK 229
            :|...|...|..|:..::.||::|:|...|....|.:||||.|||:...|:|:.: .|....||.
  Rat    90 EANEDCISKGGTLVVPRNSDEINALRDYSKRSLPGVNDFWLGINDMVTEGKFLDV-HGFAVSFLN 153

  Fly   230 WHKHRPQVQIHQRCV---HLRGGEMMDGKCSEQFLFICQLAV 268
            |.:.:|.....:.||   ....|:..|..|.....:||:..:
  Rat   154 WDRAQPSGGKRENCVLFSQSAQGKWSDEACRSSKRYICEFII 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CaNP_652642.2 CLECT 158..265 CDD:153057 30/109 (28%)
Clec3aNP_001102369.1 CLECT_tetranectin_like 68..193 CDD:153066 37/139 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 54 1.000 Inparanoid score I5345
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.960

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