DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-21Ca and Clec4a1

DIOPT Version :9

Sequence 1:NP_652642.2 Gene:lectin-21Ca / 53552 FlyBaseID:FBgn0040107 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001005890.1 Gene:Clec4a1 / 362430 RGDID:1359109 Length:243 Species:Rattus norvegicus


Alignment Length:183 Identity:42/183 - (22%)
Similarity:67/183 - (36%) Gaps:46/183 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 HLASLELQLQETKKALN----------LSVEAK--KVMPKTEIPSQFQKIGWR----HFFIEKKH 159
            |:.|..|:.:.|.:.||          .|||.|  ...||          .|:    |.:...:.
  Rat    75 HMYSDLLEEKNTLQQLNHAKLHCIKNHSSVEDKVWSCCPK----------NWKPFGSHCYFTSRD 129

  Fly   160 KVDWFKATSMCHKMGAHLLTIQSEDELDAIRTELKDINDGSHDFWLDINDI---AKWGEFISLAT 221
            ...|..:...|...|||||.|.|::|.|.|...|   |..:| :::.::|.   .|| :::. .|
  Rat   130 SASWSDSEEKCSHRGAHLLVIHSQEEQDFITDTL---NPRAH-YYVGLSDTEGHGKW-QWVD-QT 188

  Fly   222 GMNPPFLKWHKHRPQ--------VQIHQRCVHLRGGEMMDGKCSEQFLFICQL 266
            ..|.....||...|.        :..|.   :|:|.......|......:|::
  Rat   189 PFNQNATSWHADEPSGNKGFCVVLSYHP---NLKGWGWSVAPCDGYHRLVCKM 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CaNP_652642.2 CLECT 158..265 CDD:153057 27/117 (23%)
Clec4a1NP_001005890.1 CLECT_DC-SIGN_like 112..238 CDD:153060 32/144 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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