DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-21Ca and RGD1564571

DIOPT Version :9

Sequence 1:NP_652642.2 Gene:lectin-21Ca / 53552 FlyBaseID:FBgn0040107 Length:269 Species:Drosophila melanogaster
Sequence 2:XP_221808.5 Gene:RGD1564571 / 304197 RGDID:1564571 Length:207 Species:Rattus norvegicus


Alignment Length:209 Identity:43/209 - (20%)
Similarity:69/209 - (33%) Gaps:70/209 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 QRHLASLELQ--------LQETKKALNLSVEAKKVMPKTEIPSQFQ---------------KIGW 150
            ::||.||..|        ||.....|..::....::..:|:||..:               |.|.
  Rat     9 KKHLHSLGCQDHEYFITVLQLISIVLLAALLTAILVKGSEVPSSQEHDQQKQRMHQKLDQLKTGL 73

  Fly   151 RH-----------------FF--IEKKHKVDWFKATSMCHKMGAHLLTIQSEDELDAI-RTE--- 192
            .|                 ||  .:||    |.::...|..|||.|:.|:|.:|...: ||.   
  Rat    74 DHLCRPCPWDWTFFQGNCYFFSTFQKK----WKESVIACKDMGAQLVVIKSYEEQSFLQRTSKMK 134

  Fly   193 ------LKDINDGSHDFWLDINDIAKWGEFISLATGMNPPFLKWHKHRPQVQIHQRCVHLRGGEM 251
                  |.|..:.....|:|.:.: :|..:             |....|.....:.||.......
  Rat   135 GNTWIGLSDSQEEDQWLWVDGSPL-QWRNY-------------WSAGEPNNLYDEDCVEFSSYGW 185

  Fly   252 MDGKCSEQFLFICQ 265
            .|..||.:..:||:
  Rat   186 NDISCSFEKFWICK 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CaNP_652642.2 CLECT 158..265 CDD:153057 25/116 (22%)
RGD1564571XP_221808.5 CLECT_DC-SIGN_like 80..200 CDD:153060 29/138 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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