DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-21Ca and Clec4a2

DIOPT Version :9

Sequence 1:NP_652642.2 Gene:lectin-21Ca / 53552 FlyBaseID:FBgn0040107 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001005880.1 Gene:Clec4a2 / 297584 RGDID:1359163 Length:235 Species:Rattus norvegicus


Alignment Length:166 Identity:48/166 - (28%)
Similarity:75/166 - (45%) Gaps:26/166 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 QLQETKKAL------------NLSVEAKKVMPKTEIPSQFQKIGWRHFFIEKKHKVDWFKATSMC 170
            ||.|.||||            |:|:...|..  :.....::..|...:|.....|..|.::...|
  Rat    74 QLLEEKKALTDKTLNDLNCTKNVSLTEDKAC--SCCLKDWKSFGSYCYFTSTDSKATWDESKEKC 136

  Fly   171 HKMGAHLLTIQSEDELDAIRTELKDINDGSHDFWLDINDIA--KWGEFISLATGMNPPFLKWHKH 233
            .:||||||.|.|:||.|.|.|.|   |.|: |:::.::|.:  :| ::|. .|..|.....|||.
  Rat   137 SRMGAHLLVIHSQDEQDFINTIL---NIGT-DYFIGLSDHSENQW-QWID-QTPYNESVTFWHKG 195

  Fly   234 RPQVQIHQRCV---HLRGGEMMDGKCSEQFLFICQL 266
            .|..: .::||   |.......|..|.::...:||:
  Rat   196 EPNNK-EEKCVVINHRDKWGWNDIPCHDRHKSVCQV 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CaNP_652642.2 CLECT 158..265 CDD:153057 34/111 (31%)
Clec4a2NP_001005880.1 CLECT_DC-SIGN_like 107..229 CDD:153060 36/128 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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