DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-21Ca and Klrh1

DIOPT Version :9

Sequence 1:NP_652642.2 Gene:lectin-21Ca / 53552 FlyBaseID:FBgn0040107 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_631926.1 Gene:Klrh1 / 246043 RGDID:621452 Length:231 Species:Rattus norvegicus


Alignment Length:173 Identity:31/173 - (17%)
Similarity:71/173 - (41%) Gaps:44/173 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 ELQLQETKKALNLSVEAKKVMPKTEIPSQFQK-----------IGWRHFFIEKKHKVDWFKATSM 169
            :.::|..|.|...:|.:.:|:..:.:|....|           .|.:.::..::.|. |.::.:.
  Rat    68 KFKIQCEKDANKNAVSSMEVVDPSALPPTTGKGCYKCQGRWFCCGEKCYYFSEEEKT-WDESEAS 131

  Fly   170 CHKMGAHLLTIQSEDELDAIRTELKDINDGSHDFWLDINDIAKWGEFISLATGMNPPFLKW---- 230
            |..:|:||..|.:.:|.:.|::.|      ::.:|:.:.  .|.|:|:            |    
  Rat   132 CRLLGSHLAKIDNREEQNFIQSRL------NYSYWVGLR--KKGGQFL------------WVHQE 176

  Fly   231 -HKHRPQVQIHQ-------RCVHLRGGEMMDGKCSEQFLFICQ 265
             .|....:..|.       .|.:::...:.:.:||..|.:||:
  Rat   177 DEKISSDLDFHMTTHLADAACGYIKPKLLNNAQCSRLFPYICK 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CaNP_652642.2 CLECT 158..265 CDD:153057 22/118 (19%)
Klrh1NP_631926.1 Ly49 36..118 CDD:285577 8/49 (16%)
CLECT_NK_receptors_like 104..220 CDD:153063 24/137 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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