DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-21Ca and Sell

DIOPT Version :9

Sequence 1:NP_652642.2 Gene:lectin-21Ca / 53552 FlyBaseID:FBgn0040107 Length:269 Species:Drosophila melanogaster
Sequence 2:XP_030108191.1 Gene:Sell / 20343 MGIID:98279 Length:387 Species:Mus musculus


Alignment Length:129 Identity:27/129 - (20%)
Similarity:50/129 - (38%) Gaps:20/129 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 WRHFFIEKKHKVDWFKATSMCHKMGAHLLTIQSEDELDAIRTELKDINDGSHDFWLDINDIAKWG 214
            |.:.:.||  .::|..|...|.:....|:.||::.|::.:...|.   ...:.:|:.|..|.|..
Mouse    39 WTYHYSEK--PMNWENARKFCKQNYTDLVAIQNKREIEYLENTLP---KSPYYYWIGIRKIGKMW 98

  Fly   215 EFISLATGMNPPFLK----WHKHRP-QVQIHQRCVHL------RGGEMMDGKCSEQFLFICQLA 267
            .::    |.|....|    |....| ..:..:.||.:      ..|:..|..|.::...:|..|
Mouse    99 TWV----GTNKTLTKEAENWGAGEPNNKKSKEDCVEIYIKRERDSGKWNDDACHKRKAALCYTA 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CaNP_652642.2 CLECT 158..265 CDD:153057 22/117 (19%)
SellXP_030108191.1 CLECT_selectins_like 39..157 CDD:153062 26/126 (21%)
EGF_CA 160..192 CDD:238011
CCP 197..255 CDD:153056
CCP 259..317 CDD:153056
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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