DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-21Ca and Vcan

DIOPT Version :9

Sequence 1:NP_652642.2 Gene:lectin-21Ca / 53552 FlyBaseID:FBgn0040107 Length:269 Species:Drosophila melanogaster
Sequence 2:NP_001074718.1 Gene:Vcan / 13003 MGIID:102889 Length:3354 Species:Mus musculus


Alignment Length:132 Identity:30/132 - (22%)
Similarity:49/132 - (37%) Gaps:28/132 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 GWRHF----FIEKKHKVDWFKATSMCHKMGAHLLTIQSEDELDAIRTELKDINDGSHDF-WLDIN 208
            ||..|    :....|:..|..|...|...||||.:|.|.:       |...:|...||: |:.:|
Mouse  3130 GWHKFQGQCYKYFAHRRTWDAAERECRLQGAHLTSILSHE-------EQMFVNRVGHDYQWIGLN 3187

  Fly   209 DIA-----KWGEFISLATGMNPPFLKWHKHRPQ--VQIHQRCVHL---RGGEMMDGKCSEQFLFI 263
            |..     :|.:      |....:..|..::|.  ....:.||.:   ..|:..|..|:....:.
Mouse  3188 DKMFEHDFRWTD------GSALQYENWRPNQPDSFFSAGEDCVVIIWHENGQWNDVPCNYHLTYT 3246

  Fly   264 CQ 265
            |:
Mouse  3247 CK 3248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CaNP_652642.2 CLECT 158..265 CDD:153057 26/117 (22%)
VcanNP_001074718.1 IG_like 29..147 CDD:214653
Ig_Versican 36..151 CDD:143309
Link_domain_CSPGs_modules_1_3 150..244 CDD:239594
Link_domain_CSPGs_modules_2_4 251..346 CDD:239597
GAG-alpha (glucosaminoglycan attachment domain) 348..1308
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 625..646
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 801..863
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 881..908
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1010..1088
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1252..1288
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1396..1421
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1458..1524
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1924..1963
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2471..2490
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2849..2904
EGF_CA 3049..3083 CDD:238011
EGF_CA 3085..3121 CDD:238011
CLECT_CSPGs 3127..3250 CDD:153058 30/132 (23%)
CCP 3254..3310 CDD:153056
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4956
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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