DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-21Ca and si:ch211-133n4.7

DIOPT Version :9

Sequence 1:NP_652642.2 Gene:lectin-21Ca / 53552 FlyBaseID:FBgn0040107 Length:269 Species:Drosophila melanogaster
Sequence 2:XP_017207814.2 Gene:si:ch211-133n4.7 / 101885926 ZFINID:ZDB-GENE-060503-665 Length:208 Species:Danio rerio


Alignment Length:187 Identity:35/187 - (18%)
Similarity:61/187 - (32%) Gaps:69/187 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 NHKSHWNSANEVQVNETRKQLAKI-----------------------EGQEKETNDKIK------ 85
            ||.....|..||...:..|.|..:                       ..|..:||.||.      
Zfish    26 NHSYEQESEREVNTAKWNKLLLTVFAVSLVFALGGLCVVSILYVRALTQQSAQTNTKIMKRQLEE 90

  Fly    86 ------------VIHDNVDNEFNALSAKIKNVKNIQ----RHLASLELQLQETK------KALNL 128
                        .|.|::..:..|..:::|:..:|:    :.|.:...:::|.:      :|.|:
Zfish    91 LTANCSRVKDDLYIKDSMMKDLTANYSRVKDDLHIKDSMVKELTANNSRIKEQQSFYKAFRASNM 155

  Fly   129 SVEAKKVMPKTEIPSQFQKIGWRHFFIEKKHKVDWFKATSMCHKMGAHLLTIQSEDE 185
            :.              ||  |..:||  ...|:.|..:.:.|...|..|:||.|..|
Zfish   156 TA--------------FQ--GKLYFF--SSDKLTWSSSRAFCVSRGTDLVTITSRSE 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CaNP_652642.2 CLECT 158..265 CDD:153057 9/28 (32%)
si:ch211-133n4.7XP_017207814.2 Ly49 54..>124 CDD:312037 9/69 (13%)
CLECT 158..>195 CDD:321932 14/41 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.