DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-21Ca and clec4e

DIOPT Version :10

Sequence 1:NP_652642.2 Gene:lectin-21Ca / 53552 FlyBaseID:FBgn0040107 Length:269 Species:Drosophila melanogaster
Sequence 2:XP_004917035.1 Gene:clec4e / 100497788 XenbaseID:XB-GENE-6035508 Length:218 Species:Xenopus tropicalis


Alignment Length:182 Identity:47/182 - (25%)
Similarity:77/182 - (42%) Gaps:37/182 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 SAKIKNVKNIQRHLASLELQLQETKKALNLSVEAKKVMPKTEIPSQFQKIGWRHF-----FIEKK 158
            ||...::||....|||....::..|:|.:.:                    |..|     :|..|
 Frog    60 SADSNDLKNYVAQLASKVNAMEAKKEACDSA--------------------WIQFEDSCYYITTK 104

  Fly   159 HKVDWFKATSMCHKMGAHLLTIQSEDELDAIRTELKDINDGSH--DFWLDINDIAKWGEFISL-A 220
             |.:|.||.|.|.:.|..|:.:.||.|    :..||:.:..|:  .||:.::||.:.|.:..: .
 Frog   105 -KTNWQKARSFCVQEGGDLVVVNSEKE----QKFLKEKSGVSNLKRFWIGLSDIEEEGTWTWVDG 164

  Fly   221 TGMNPPFLKWHKHRPQVQI-HQRCVHLRG--GEMMDGKCSEQFLF-ICQLAV 268
            |..:..:..|.|..|...: ::.|.||..  ||..|..|:.|..: ||:..|
 Frog   165 TDYSTSYQFWKKGEPNDHLTNEDCAHLWNPTGEWNDVHCTFQEPYAICEKKV 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CaNP_652642.2 CLECT 158..265 CDD:153057 33/113 (29%)
clec4eXP_004917035.1 CLECT_DC-SIGN_like 87..214 CDD:153060 37/151 (25%)

Return to query results.
Submit another query.