DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-21Ca and mrc1

DIOPT Version :10

Sequence 1:NP_652642.2 Gene:lectin-21Ca / 53552 FlyBaseID:FBgn0040107 Length:269 Species:Drosophila melanogaster
Sequence 2:XP_012821081.2 Gene:mrc1 / 100493504 XenbaseID:XB-GENE-494275 Length:1450 Species:Xenopus tropicalis


Alignment Length:166 Identity:38/166 - (22%)
Similarity:65/166 - (39%) Gaps:21/166 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 QETKKALNLSVEAKKVMPKTEIPSQFQKIGWRHFFI---EKKHKVDWFKATSMCHKMGAHLLTIQ 181
            :....::|.:.......|:...||.:...|.|.:.|   .|....||..|.:.|.:...:|.|::
 Frog   920 ERKNSSINATFAPTPASPQGGCPSDWITFGKRCYKIFGNGKGEATDWDSARTACMRFNGNLATVE 984

  Fly   182 SEDELDAIRTELKDINDGSHDFWLDINDIAKWGEFI-SLATGMNPPFLKWHKHRP------QVQI 239
            :|.....:...|||:|   .|.|:.:||..:...|: :...|:.  :..|.|..|      ....
 Frog   985 NELVQAFLTYNLKDLN---IDVWIGMNDKNEEHRFLWTDQRGVY--YTNWAKGHPTGSRYYSADD 1044

  Fly   240 HQRCVHLRGGEMMDG------KCSEQFLFICQLAVN 269
            ...||.::.|..:|.      :||....:|||...|
 Frog  1045 DTDCVSIKRGSTLDAGSWFEEECSLSRGYICQTDKN 1080

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-21CaNP_652642.2 CLECT 158..265 CDD:153057 27/119 (23%)
mrc1XP_012821081.2 beta-trefoil_Ricin_MRC1 22..143 CDD:467785
FN2 159..207 CDD:128373
CLECT 227..339 CDD:153057
CLECT 359..483 CDD:214480
CLECT 501..623 CDD:214480
CLECT 643..775 CDD:470576
CLECT 799..920 CDD:214480 38/166 (23%)
CLECT 941..1076 CDD:214480 33/139 (24%)
CLECT 1095..1209 CDD:214480
CLECT 1226..1355 CDD:214480
Blue background indicates that the domain is not in the aligned region.

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