DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-24Db and colec10

DIOPT Version :9

Sequence 1:NP_652641.1 Gene:lectin-24Db / 53550 FlyBaseID:FBgn0040102 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_001276917.1 Gene:colec10 / 794040 ZFINID:ZDB-GENE-131127-525 Length:271 Species:Danio rerio


Alignment Length:126 Identity:27/126 - (21%)
Similarity:56/126 - (44%) Gaps:30/126 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 LFYINHKDAYDWQSAVDFCRDMGGYIAAIKDQEELDAISARLDDKSYWLG--INDLQSSNTYVSV 307
            :||:...:|..:|.::..|:..||.:|           .:|.::|:..|.  |.:...::.::.:
Zfish   147 MFYLLVTEARTYQQSLLNCKLRGGTLA-----------MSRTEEKNNLLANFIKEADLNHVFIRL 200

  Fly   308 ASG-REVEFLNWNAGEP------------NHGNEDENCVELIRS-KMNDDPCHRKKHVICQ 354
            .:| .||.::..| |.|            :.|..|  ||:|.|: .::...|...::.||:
Zfish   201 QAGVTEVGYMYLN-GNPLLNTTAWAIQGADSGKGD--CVQLGRTGALSQVDCGATQYYICE 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24DbNP_652641.1 ExsD <44..>156 CDD:293411
NAT_SF <170..>229 CDD:302625
CLECT 247..354 CDD:153057 25/122 (20%)
colec10NP_001276917.1 Collagen 54..106 CDD:189968
CLECT 148..259 CDD:295302 27/125 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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