DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-24Db and SELP

DIOPT Version :10

Sequence 1:NP_652641.1 Gene:lectin-24Db / 53550 FlyBaseID:FBgn0040102 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_002996.2 Gene:SELP / 6403 HGNCID:10721 Length:830 Species:Homo sapiens


Alignment Length:156 Identity:43/156 - (27%)
Similarity:72/156 - (46%) Gaps:36/156 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 VFWPKFERIGSRLFYI--------------NHKD-----------AYDWQSAVDFCRDMGGYIAA 272
            :.:.:|:|:   :|.|              |.|:           ||.|..:..:|::....:.|
Human     8 ILYQRFQRV---VFGISQLLCFSALISELTNQKEVAAWTYHYSTKAYSWNISRKYCQNRYTDLVA 69

  Fly   273 IKDQEELDAISARLDDKS--YWLGINDLQSSNTYVSVASGREVEFLNWNAGEPNHGNEDENCVEL 335
            |:::.|:|.::..|...|  ||:||.....:.|:|........|..||...|||:...:|:|||:
Human    70 IQNKNEIDYLNKVLPYYSSYYWIGIRKNNKTWTWVGTKKALTNEAENWADNEPNNKRNNEDCVEI 134

  Fly   336 -IRS-----KMNDDPCHRKKHVICQT 355
             |:|     |.||:.|.:|||.:|.|
Human   135 YIKSPSAPGKWNDEHCLKKKHALCYT 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24DbNP_652641.1 IFT57 <64..215 CDD:463118
CLECT 247..354 CDD:153057 38/139 (27%)
SELPNP_002996.2 CLECT_selectins_like 42..160 CDD:153062 36/117 (31%)
EGF_CA <168..195 CDD:238011
PHA02927 219..443 CDD:222943
PHA02927 342..567 CDD:222943
PHA02927 505..761 CDD:222943
Endocytosis signal. /evidence=ECO:0000305 818..821
Interaction with SNX17 821..830
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.