DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24Db and Clec9a

DIOPT Version :9

Sequence 1:NP_652641.1 Gene:lectin-24Db / 53550 FlyBaseID:FBgn0040102 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_001102824.1 Gene:Clec9a / 502901 RGDID:1562513 Length:241 Species:Rattus norvegicus


Alignment Length:195 Identity:35/195 - (17%)
Similarity:74/195 - (37%) Gaps:46/195 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 IEEQQKLLQETLKKIPEDFERKLQKLEQNQKDELTKLGAQQSANQVTLKE-IYTKVFWPKFERIG 242
            :|::::|:::         :..|..|.:.|::...:|.:.|::.|.:|:. .......|.:.:.|
  Rat    66 MEQRERLIRQ---------DTALLNLTEWQRNHTLQLKSCQASLQRSLRSGSNCNPCPPNWIQNG 121

  Fly   243 SRLFYINHKDAYD----WQSAVDFCRDMGGYIAAIKDQEELDAISARL----DDKSYWLGI-NDL 298
            ...:|     |:|    |.::...|...|..:..|..:||::.|:..:    ....||:|: .|.
  Rat   122 KSCYY-----AFDRWETWNNSKKSCLKEGDSLLQIDSKEEMEFINLSIWKLKGGYEYWVGVFQDG 181

  Fly   299 QSSNTYVSVASGREVEFLNWNAGE---------PNHGNEDENCVELIRSKMNDDPCHRKKHVICQ 354
            .|.:.:             |..|.         ....:..:.|..|....:..|.|...|:.||:
  Rat   182 PSGSWF-------------WEDGSSPLSDLLPTDRQLSASQICGYLKDHTLISDNCSNWKYFICE 233

  Fly   355  354
              Rat   234  233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24DbNP_652641.1 ExsD <44..>156 CDD:293411
NAT_SF <170..>229 CDD:302625 9/50 (18%)
CLECT 247..354 CDD:153057 23/124 (19%)
Clec9aNP_001102824.1 ITAM-like 5..10
CLECT_NK_receptors_like 113..234 CDD:153063 26/139 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 49 1.000 Inparanoid score I5382
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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