DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-24Db and Cd209e

DIOPT Version :9

Sequence 1:NP_652641.1 Gene:lectin-24Db / 53550 FlyBaseID:FBgn0040102 Length:359 Species:Drosophila melanogaster
Sequence 2:XP_006248837.1 Gene:Cd209e / 501797 RGDID:1563333 Length:215 Species:Rattus norvegicus


Alignment Length:186 Identity:43/186 - (23%)
Similarity:77/186 - (41%) Gaps:30/186 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 MRLAQIEEQQKLLQETLKKIPEDFERKLQKLEQ--NQKDELTKLGAQQSANQVTLKEIYTKVFWP 236
            :::::|...:::..|..|:     |:..|.|.|  ::.|.|.:|....               |.
  Rat    46 IQVSKIPSSEEVQWEQTKQ-----EKMYQDLSQLKSEIDSLCRLCPWD---------------WT 90

  Fly   237 KFERIGSRLFYINHKDAYDWQSAVDFCRDMGGYIAAIKDQEELDAISARLDDKSY-WLGINDLQS 300
            .|.  |:..|:  .|...||.:::..|::|...:..||..||...:........| |:|::||..
  Rat    91 FFN--GNCYFF--SKSQRDWHNSITACQEMEAQLVTIKSPEEQSFLQQTSKKNGYTWMGLSDLNK 151

  Fly   301 SNTYVSVASGREVEFLN--WNAGEPNHGNEDENCVELIRSKMNDDPCHRKKHVICQ 354
            ...:..:......:.|.  ||.|:||: .:.::|||......||..|...|..||:
  Rat   152 EGEWYWLDGSPLSDSLRNYWNEGQPNN-IDGQDCVEFRNDGWNDAKCDNWKFWICK 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24DbNP_652641.1 ExsD <44..>156 CDD:293411
NAT_SF <170..>229 CDD:302625 10/56 (18%)
CLECT 247..354 CDD:153057 28/109 (26%)
Cd209eXP_006248837.1 CLECT_DC-SIGN_like 85..207 CDD:153060 33/142 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100086
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.