DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24Db and Ly49i3

DIOPT Version :9

Sequence 1:NP_652641.1 Gene:lectin-24Db / 53550 FlyBaseID:FBgn0040102 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_001009499.1 Gene:Ly49i3 / 494208 RGDID:1359730 Length:280 Species:Rattus norvegicus


Alignment Length:195 Identity:38/195 - (19%)
Similarity:76/195 - (38%) Gaps:29/195 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 NFEMRLAQIEEQQKLLQETLKKIPED---FERKLQKLEQNQKDELTKLGAQQSANQVTLKEIYTK 232
            |.....:.||...||.:|.|:.|..:   :...|..:.:.||....|.....::.|.|.:  ..:
  Rat    83 NCHHNCSTIENDIKLKEEMLRNISVESVHYNAFLDLINREQKRWYKKTKTVLASPQHTGR--CDE 145

  Fly   233 VFWPKFERIGSRLFYINHKDAYDWQSAVDFCRDMGGYIAAIKDQEELDAISARLDDKSYWLGIND 297
            :.|..:   |.:.:|.. .|...|:.....|::.......|.|::||..:...:...:||:|   
  Rat   146 MHWFCY---GIKCYYFT-MDIRIWRECKQICQNYSLSFLKIDDKDELKFLQDHIIRDNYWIG--- 203

  Fly   298 LQSSNTYVSVASGREVEFLNWNAGEPNHGN--------EDENCVELIRSKMNDDPCHRKKHVICQ 354
                    |..:.::.|: :|....|.:.:        :...|:....|.::||.|.::...||:
  Rat   204 --------SSYNNKKKEW-SWIDNSPFNLDFVARTLLRKTGYCLYFSMSGLHDDDCGKRYLCICE 259

  Fly   355  354
              Rat   260  259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24DbNP_652641.1 ExsD <44..>156 CDD:293411
NAT_SF <170..>229 CDD:302625 14/60 (23%)
CLECT 247..354 CDD:153057 21/114 (18%)
Ly49i3NP_001009499.1 Ly49 40..158 CDD:400616 16/79 (20%)
CLECT_NK_receptors_like 145..260 CDD:153063 24/131 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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