DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24Db and Clec4a

DIOPT Version :9

Sequence 1:NP_652641.1 Gene:lectin-24Db / 53550 FlyBaseID:FBgn0040102 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_001005899.2 Gene:Clec4a / 474143 RGDID:1359662 Length:240 Species:Rattus norvegicus


Alignment Length:193 Identity:47/193 - (24%)
Similarity:83/193 - (43%) Gaps:56/193 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 FERKLQKLEQNQKDELTKLGAQQSANQVTLKE--------IYTKVFW---PK-FERIGSRLFYI- 248
            |::..|.||:           :::...:|.||        :..:..|   || ::..||..::: 
  Rat    69 FQKYSQFLEE-----------KKAIKGITHKELNCIKNVLLMEEKSWSCCPKNWKPFGSHCYWVT 122

  Fly   249 NHKDAY---DWQSAVDFCRDMGGYIAAIKDQEELDAISARLD-DKSYWLGINDLQSSNTYVSVAS 309
            .|...|   .|..:...|..||.::..|..:||.|.|:..|: |.:|::|:.|           |
  Rat   123 KHTSTYSKASWNESEKNCFSMGAHLLVIHSKEEQDFITGILNRDAAYFIGLWD-----------S 176

  Fly   310 G-REVEFLN----------WNAGEPNHGNEDENCVELIRSK----MNDDPCHRKKHVICQTDK 357
            | |:.::::          |:.|||:  ::||.||.:....    .||.||..|:..:||..|
  Rat   177 GHRQWQWVSQTPYNASATFWHKGEPS--SDDEKCVIINHLNSGWGWNDIPCSGKQQSVCQMKK 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24DbNP_652641.1 ExsD <44..>156 CDD:293411
NAT_SF <170..>229 CDD:302625 7/39 (18%)
CLECT 247..354 CDD:153057 32/126 (25%)
Clec4aNP_001005899.2 ITIM motif 5..10
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 18..38
CLECT_DC-SIGN_like 107..235 CDD:153060 37/140 (26%)
Mannose binding. /evidence=ECO:0000250|UniProtKB:Q9UMR7 200..202 1/1 (100%)
N-acetyl-D-glucosamine binding. /evidence=ECO:0000250|UniProtKB:Q9UMR7 211..213 0/1 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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