DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24Db and Clec4a

DIOPT Version :10

Sequence 1:NP_652641.1 Gene:lectin-24Db / 53550 FlyBaseID:FBgn0040102 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_001005899.2 Gene:Clec4a / 474143 RGDID:1359662 Length:240 Species:Rattus norvegicus


Alignment Length:193 Identity:47/193 - (24%)
Similarity:83/193 - (43%) Gaps:56/193 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 FERKLQKLEQNQKDELTKLGAQQSANQVTLKE--------IYTKVFW---PK-FERIGSRLFYI- 248
            |::..|.||:           :::...:|.||        :..:..|   || ::..||..::: 
  Rat    69 FQKYSQFLEE-----------KKAIKGITHKELNCIKNVLLMEEKSWSCCPKNWKPFGSHCYWVT 122

  Fly   249 NHKDAY---DWQSAVDFCRDMGGYIAAIKDQEELDAISARLD-DKSYWLGINDLQSSNTYVSVAS 309
            .|...|   .|..:...|..||.::..|..:||.|.|:..|: |.:|::|:.|           |
  Rat   123 KHTSTYSKASWNESEKNCFSMGAHLLVIHSKEEQDFITGILNRDAAYFIGLWD-----------S 176

  Fly   310 G-REVEFLN----------WNAGEPNHGNEDENCVELIRSK----MNDDPCHRKKHVICQTDK 357
            | |:.::::          |:.|||:  ::||.||.:....    .||.||..|:..:||..|
  Rat   177 GHRQWQWVSQTPYNASATFWHKGEPS--SDDEKCVIINHLNSGWGWNDIPCSGKQQSVCQMKK 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24DbNP_652641.1 IFT57 <64..215 CDD:463118 4/17 (24%)
CLECT 247..354 CDD:153057 32/126 (25%)
Clec4aNP_001005899.2 ITIM motif 5..10
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 18..38
CLECT_DC-SIGN_like 107..235 CDD:153060 37/140 (26%)
Blue background indicates that the domain is not in the aligned region.

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