DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24Db and Colec11

DIOPT Version :9

Sequence 1:NP_652641.1 Gene:lectin-24Db / 53550 FlyBaseID:FBgn0040102 Length:359 Species:Drosophila melanogaster
Sequence 2:XP_006240022.1 Gene:Colec11 / 366588 RGDID:1309678 Length:277 Species:Rattus norvegicus


Alignment Length:225 Identity:48/225 - (21%)
Similarity:86/225 - (38%) Gaps:73/225 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 QKTLGDQLENQI-NLTKESQQDQLEALKNAMPINFEMRLAQIEEQQKLLQETLKKIPEDFERKLQ 202
            :|.:| :::||: .||.|     ::.:|||:|                                 
  Rat   119 RKAIG-EMDNQVTQLTTE-----IKFIKNALP--------------------------------- 144

  Fly   203 KLEQNQKDELTKLGAQQSANQVTLKEIYTKVFWPKFERIGSRLFYINHKDAYDWQSAVDFCRDMG 267
                            ..|....::|..:|:             |:..|:...:..|...|:..|
  Rat   145 ----------------SPAAVAGVRETESKI-------------YLLVKEEKRYADAQLSCQGRG 180

  Fly   268 GYIAAIKDQEELDAISARLDDKS---YWLGINDLQSSNTYVSVASGREVEFLNWNAGEPNHGNED 329
            |.::..||:.....:::.|....   .::|||||:....:|.........|..|.:||||:..::
  Rat   181 GTLSMPKDEAANGLMASYLAQAGLARVFIGINDLEREGAFVYSDRSPMQTFNKWRSGEPNNAYDE 245

  Fly   330 ENCVELIRS-KMNDDPCHRKKHVICQTDKE 358
            |:|||::.| ..||..||...:.:|:.|||
  Rat   246 EDCVEMVASGGWNDVACHITMYFMCEFDKE 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24DbNP_652641.1 ExsD <44..>156 CDD:293411 6/17 (35%)
NAT_SF <170..>229 CDD:302625 1/58 (2%)
CLECT 247..354 CDD:153057 30/110 (27%)
Colec11XP_006240022.1 Collagen 40..95 CDD:189968
CLECT_collectin_like 157..272 CDD:153061 32/127 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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