DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-24Db and Cd209d

DIOPT Version :10

Sequence 1:NP_652641.1 Gene:lectin-24Db / 53550 FlyBaseID:FBgn0040102 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_001102319.1 Gene:Cd209d / 363856 RGDID:1561104 Length:237 Species:Rattus norvegicus


Alignment Length:230 Identity:47/230 - (20%)
Similarity:79/230 - (34%) Gaps:75/230 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 EDFERKLQKLEQNQKDEL---------------TKLG-------AQQSANQVTL----------- 226
            |..|...|:|:..:.:|.               ||.|       .:||.|.:.|           
  Rat     3 ESMESNTQQLDNPEDEEYLMSGSRYSIISSRLRTKFGIKSLAEYTKQSHNPLVLPLLSFLFLAGL 67

  Fly   227 -------------KEIYTKVF---------------------WPKFERIGSRLFYINHKDAYDWQ 257
                         .|:..|::                     |..|.  ||..|:  .|...:|.
  Rat    68 LLIILVLVSKVPSSEVQDKIYQELMQLKTEVHDGLCQPCPRDWTFFN--GSCYFF--SKSQRNWH 128

  Fly   258 SAVDFCRDMGGYIAAIKDQEELDAISARLDDKS-YWLGINDLQSSNTYVSV-ASGREVEFLN-WN 319
            :::..|:::|..:..::..||...:......:. .|:|::|:.:..|:..| .|.....|.. ||
  Rat   129 NSITACKELGAQLVIVETDEEQTFLQQTSKTRGPTWMGLSDMHNEATWHWVDGSPLSPSFAQYWN 193

  Fly   320 AGEPNHGNEDENCVELIRSKMNDDPCHRKKHVICQ 354
            .||||:.. ||:|.|......||..|..:...||:
  Rat   194 RGEPNNVG-DEDCAEFSGDGWNDLRCDTRIFWICK 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24DbNP_652641.1 IFT57 <64..215 CDD:463118 6/34 (18%)
CLECT 247..354 CDD:153057 27/109 (25%)
Cd209dNP_001102319.1 CLECT_DC-SIGN_like 106..228 CDD:153060 33/127 (26%)

Return to query results.
Submit another query.