DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24Db and Clec4a3

DIOPT Version :10

Sequence 1:NP_652641.1 Gene:lectin-24Db / 53550 FlyBaseID:FBgn0040102 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_001005891.1 Gene:Clec4a3 / 362431 RGDID:1359528 Length:237 Species:Rattus norvegicus


Alignment Length:215 Identity:44/215 - (20%)
Similarity:88/215 - (40%) Gaps:66/215 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 NAMPINFEMRLAQIEEQQKLLQETLKKIPEDFERKLQKLEQNQKDELTKLGAQQSANQVTLKEIY 230
            :|:.|.|: :.:|:.|::.:::|.          ...:||..:.|.|                :.
  Rat    63 SALIILFK-KYSQLLEEKTIMKEL----------NYTELECTKWDSL----------------LE 100

  Fly   231 TKVF------WPKFERIGSRLFYINHKDAYDWQSAVDFCRDMGGYIAAIKDQEELDAISARLD-D 288
            .||:      |..|:   |..::.:......|..:.:.|..:|.::..|..|||.|.:...|| .
  Rat   101 DKVWSCCPKDWKPFD---SNCYFPSTDSVESWMESEEKCSGIGAHLVVIHSQEEQDFLPRILDTH 162

  Fly   289 KSYWLGINDLQSSNTYVSVASGREVEFLN----------WNAGEPNHGNEDENCVELIRSKMN-- 341
            .:|::|::|          ...|:.::::          |:.|||:  :::|.|| :|....|  
  Rat   163 AAYFIGLSD----------PGHRQWQWVDQTPYNGNATFWHEGEPS--SDNEQCV-IINHHENTG 214

  Fly   342 ----DDPCHRKKHVICQTDK 357
                |..|..|:.::||..|
  Rat   215 WGWSDSSCSDKQKLVCQVKK 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24DbNP_652641.1 IFT57 <64..215 CDD:463118 10/48 (21%)
CLECT 247..354 CDD:153057 26/123 (21%)
Clec4a3NP_001005891.1 CLECT_DC-SIGN_like 107..231 CDD:153060 29/139 (21%)

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