DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-24Db and Clec4a1

DIOPT Version :10

Sequence 1:NP_652641.1 Gene:lectin-24Db / 53550 FlyBaseID:FBgn0040102 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_001005890.1 Gene:Clec4a1 / 362430 RGDID:1359109 Length:243 Species:Rattus norvegicus


Alignment Length:168 Identity:40/168 - (23%)
Similarity:68/168 - (40%) Gaps:32/168 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 DELTKLGAQQSANQVTL------KEIYTKVF------WPKFERIGSRLFYINHKDAYDWQSAVDF 262
            |.|.:....|..|...|      ..:..||:      |..|   ||.. |...:|:..|..:.:.
  Rat    79 DLLEEKNTLQQLNHAKLHCIKNHSSVEDKVWSCCPKNWKPF---GSHC-YFTSRDSASWSDSEEK 139

  Fly   263 CRDMGGYIAAIKDQEELDAISARLDDKS-YWLGINDLQSSNTYVSVASGREVEF----LNWNAGE 322
            |...|.::..|..|||.|.|:..|:.:: |::|::|.:....:..|   .:..|    .:|:|.|
  Rat   140 CSHRGAHLLVIHSQEEQDFITDTLNPRAHYYVGLSDTEGHGKWQWV---DQTPFNQNATSWHADE 201

  Fly   323 PNHGNEDENCVELIRSK------MNDDPCHRKKHVICQ 354
            |: ||:. .||.|....      .:..||.....::|:
  Rat   202 PS-GNKG-FCVVLSYHPNLKGWGWSVAPCDGYHRLVCK 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24DbNP_652641.1 IFT57 <64..215 CDD:463118 2/4 (50%)
CLECT 247..354 CDD:153057 28/117 (24%)
Clec4a1NP_001005890.1 CLECT_DC-SIGN_like 112..238 CDD:153060 33/135 (24%)

Return to query results.
Submit another query.