DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24Db and Ly49s3

DIOPT Version :9

Sequence 1:NP_652641.1 Gene:lectin-24Db / 53550 FlyBaseID:FBgn0040102 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_714948.1 Gene:Ly49s3 / 266768 RGDID:628683 Length:277 Species:Rattus norvegicus


Alignment Length:191 Identity:37/191 - (19%)
Similarity:70/191 - (36%) Gaps:37/191 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 IEEQQKLLQETLKKIPEDFER-----KLQKLEQNQ--KDELTKLGAQQSANQVTLKEIYTKVFWP 236
            :|:..||.:|.|:.:..:...     .|...|||:  |...|.|.:.|.....      .::.|.
  Rat    88 MEKDIKLKEEMLRNMSVESVHYNAFLDLINREQNRWYKKTKTVLASPQHTGGC------DEMHWF 146

  Fly   237 KFERIGSRLFYINHKDAYDWQSAVDFCRDMGGYIAAIKDQEELDAISARLDDKSYWLGINDLQSS 301
            .:   |.:.:|.. .|...|:.....|::.......|.|::||..:...:...:||:|       
  Rat   147 CY---GIKCYYFT-MDIRIWRECKQTCQNYSLSFLKIDDKDELKFLQDHIIRDNYWIG------- 200

  Fly   302 NTYVSVASGREVEFLNWNAGEP--------NHGNEDENCVELIRSKMNDDPCHRKKHVICQ 354
                |..:.::.|:. |....|        ....:...|:....|.::||.|.::...||:
  Rat   201 ----SSYNNKKKEWA-WIDNSPFDLDFVARTLLRKTGYCLYFSMSGLHDDDCGKRYLCICE 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24DbNP_652641.1 ExsD <44..>156 CDD:293411
NAT_SF <170..>229 CDD:302625 13/56 (23%)
CLECT 247..354 CDD:153057 21/114 (18%)
Ly49s3NP_714948.1 Ly49 38..155 CDD:285577 15/75 (20%)
CLECT_NK_receptors_like 142..257 CDD:153063 24/131 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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