DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24Db and Sftpd

DIOPT Version :9

Sequence 1:NP_652641.1 Gene:lectin-24Db / 53550 FlyBaseID:FBgn0040102 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_037010.1 Gene:Sftpd / 25350 RGDID:3667 Length:374 Species:Rattus norvegicus


Alignment Length:182 Identity:40/182 - (21%)
Similarity:76/182 - (41%) Gaps:36/182 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 AQIEEQQKLLQETLKKIPEDFERKLQKLEQNQKDELTKLGAQQSANQVTLKEIYTK-VFWPKFER 240
            |.:.:|.:.|...|:::...|.|                              |.| ..:|..:.
  Rat   224 AALRQQMEALNGKLQRLEAAFSR------------------------------YKKAALFPDGQS 258

  Fly   241 IGSRLFYINHKDAYDWQSAVDFCRDMGGYIAAIKDQEELDAIS--ARLDDKSYWLGINDLQSSNT 303
            :|.::|...:.:. .::.|.:.||..||.:|:.:...|..|:.  .....|:.:|.:.|:.:...
  Rat   259 VGDKIFRAANSEE-PFEDAKEMCRQAGGQLASPRSATENAAVQQLVTAHSKAAFLSMTDVGTEGK 322

  Fly   304 YVSVASGREVEFLNWNAGEPNHGNEDENCVELI-RSKMNDDPCHRKKHVICQ 354
            : :..:|..:.:.||..||||:....|||||:. ..:.||..|..::.|||:
  Rat   323 F-TYPTGEALVYSNWAPGEPNNNGGAENCVEIFTNGQWNDKACGEQRLVICE 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24DbNP_652641.1 ExsD <44..>156 CDD:293411
NAT_SF <170..>229 CDD:302625 6/51 (12%)
CLECT 247..354 CDD:153057 28/109 (26%)
SftpdNP_037010.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..221
Collagen 41..89 CDD:189968
Collagen 66..124 CDD:189968
Collagen 114..172 CDD:189968
Surfac_D-trimer 223..268 CDD:286141 11/73 (15%)
CLECT 261..374 CDD:295302 30/115 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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