DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24Db and Sftpa1

DIOPT Version :10

Sequence 1:NP_652641.1 Gene:lectin-24Db / 53550 FlyBaseID:FBgn0040102 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_001257574.1 Gene:Sftpa1 / 24773 RGDID:3665 Length:258 Species:Rattus norvegicus


Alignment Length:117 Identity:32/117 - (27%)
Similarity:57/117 - (48%) Gaps:6/117 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 IGSRLFYINHKDAYDWQSAVDFCRDMGGYIAAIKDQEELDAIS--ARLDDKSYWLGINDLQSSNT 303
            :|.::|..|.: :.::.:..:.|...||.||..:..||.:||:  |:..:...:||:.:.|:...
  Rat   144 VGDKVFSTNGQ-SVNFDTIKEMCTRAGGNIAVPRTPEENEAIASIAKKYNNYVYLGMIEDQTPGD 207

  Fly   304 YVSVASGREVEFLNWNAGEPNHGNEDENCVELIR-SKMNDDPCHRKKHVICQ 354
            : ....|..|.:.||..||| .|...|.|||:.. ...||..|.:.:..:|:
  Rat   208 F-HYLDGASVNYTNWYPGEP-RGQGKEKCVEMYTDGTWNDRGCLQYRLAVCE 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24DbNP_652641.1 IFT57 <64..215 CDD:463118
CLECT 247..354 CDD:153057 29/109 (27%)
Sftpa1NP_001257574.1 Collagen 37..108 CDD:460189
CLECT_collectin_like 146..258 CDD:153061 31/115 (27%)
Blue background indicates that the domain is not in the aligned region.

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