DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24Db and Reg1a

DIOPT Version :10

Sequence 1:NP_652641.1 Gene:lectin-24Db / 53550 FlyBaseID:FBgn0040102 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_036773.1 Gene:Reg1a / 24714 RGDID:3552 Length:165 Species:Rattus norvegicus


Alignment Length:133 Identity:29/133 - (21%)
Similarity:63/133 - (47%) Gaps:12/133 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 KVFWPKFERIGSRLFYINHKDAYDWQSAVDFCRDM-GGYIAAIKDQEELDAISARLDDK-----S 290
            ::..|:.....|...|...:|...|..|..||::| .||:.::..|.|.:.:::.:.:.     :
  Rat    32 RITCPEGSNAYSSYCYYFMEDHLSWAEADLFCQNMNSGYLVSVLSQAEGNFLASLIKESGTTAAN 96

  Fly   291 YWLGINDLQSSNTYVSVASGREVEFLNWNAGEPNHGNEDENCVELIRS----KMNDDPCHRKKHV 351
            .|:|::|.:::..: ..:||....:.:|:.|.||:.|.. .||.:..:    |..|:.|..:...
  Rat    97 VWIGLHDPKNNRRW-HWSSGSLFLYKSWDTGYPNNSNRG-YCVSVTSNSGYKKWRDNSCDAQLSF 159

  Fly   352 ICQ 354
            :|:
  Rat   160 VCK 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24DbNP_652641.1 IFT57 <64..215 CDD:463118
CLECT 247..354 CDD:153057 26/116 (22%)
Reg1aNP_036773.1 CLECT 35..163 CDD:470576 29/130 (22%)
Blue background indicates that the domain is not in the aligned region.

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