DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24Db and Mbl1

DIOPT Version :9

Sequence 1:NP_652641.1 Gene:lectin-24Db / 53550 FlyBaseID:FBgn0040102 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_036731.2 Gene:Mbl1 / 24548 RGDID:3055 Length:238 Species:Rattus norvegicus


Alignment Length:183 Identity:43/183 - (23%)
Similarity:72/183 - (39%) Gaps:40/183 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 EMRLAQIEEQQKLLQETLKKIPEDFERKLQKLEQNQKDELTKLGAQQSANQVTLKEIYTKVFWPK 237
            |::||.:|.:    ..|||          .|||...|.....:|                     
  Rat    92 EVKLANMEAE----INTLK----------SKLELTNKLHAFSMG--------------------- 121

  Fly   238 FERIGSRLFYINHKDAYDWQSAVDFCRDMGGYIAAIKDQEELDAISARLDDKSYWLGINDLQSSN 302
             ::.|.:.|..|| :...:......|.::.|.:|..::.||..||. .:...|.:|||.|..:..
  Rat   122 -KKSGKKFFVTNH-ERMPFSKVKALCSELRGTVAIPRNAEENKAIQ-EVAKTSAFLGITDEVTEG 183

  Fly   303 TYVSVASGREVEFLNWNAGEPNHGNEDENCVELIRSKM-NDDPCHRKKHVICQ 354
            .::.|..|| :.:.||...|||.....|:||.::.:.: ||..|......:|:
  Rat   184 QFMYVTGGR-LTYSNWKKDEPNDHGSGEDCVTIVDNGLWNDISCQASHTAVCE 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24DbNP_652641.1 ExsD <44..>156 CDD:293411
NAT_SF <170..>229 CDD:302625 12/55 (22%)
CLECT 247..354 CDD:153057 28/107 (26%)
Mbl1NP_036731.2 Collagen 36..>88 CDD:189968
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 38..87
CLECT_collectin_like 126..236 CDD:153061 30/113 (27%)
Calcium-dependent carbohydrate binding. /evidence=ECO:0000269|PubMed:11850428, ECO:0000269|PubMed:1436090, ECO:0000269|PubMed:9033386 202..210 3/7 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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