DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment lectin-24Db and clec-149

DIOPT Version :9

Sequence 1:	NP_652641.1	Gene:	lectin-24Db / 53550	FlyBaseID:	FBgn0040102	Length:	359	Species:	Drosophila melanogaster
Sequence 2:	NP_497267.2	Gene:	clec-149 / 186903	WormBaseID:	WBGene00019328	Length:	308	Species:	Caenorhabditis elegans

Alignment Length:	201	Identity:	45/201 - (22%)
Similarity:	92/201 - (45%)	Gaps:	37/201 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly   167 AMPINFEMRLAQIEEQQKLLQETLKKIPE---DFERKLQKLEQNQKDELTKLGAQQSANQVTLKE 228
            |:...|:.:|.:::...:  .||.|.:.:   .||..|::.|                 ::|.|:
Worm   129 ALEAKFDKKLYEVKMHAQ--YETEKGVGDLRKQFETDLREYE-----------------RITTKD 174

  Fly   229 I--------YTKVFWPKFERIGSRLFYINHKDAYDWQSAVDFCRDMGGYIAAIKDQEELDAISAR 285
            |        |.:.  |:........|:|..:::  |.:|.:.|...|.::|:|..:.||..:...
Worm   175 IVEIKRHLDYLQA--PRITNNDLEYFFIQREES--WYTASEKCIGYGAHLASIHSRLELGFVQRL 235

  Fly   286 LD-DKSYWLGINDLQSSNTYVSVASGREVEFLNWNAGEPNHGNEDENCVELIRS-KMNDDPCHRK 348
            :. :::.|:|:||:|..|.:.: :.|..|:|..|...:|::...:|||||:..| :..|..|...
Worm   236 VPVNQTAWIGVNDIQKENVFRN-SDGTPVDFYKWGKKQPDNQEHNENCVEVDHSGQWTDKLCIIT 299

  Fly   349 KHVICQ 354
            :..:|:
Worm   300 RPFVCK 305

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
lectin-24Db	NP_652641.1	ExsD	<44..>156	CDD:293411
		NAT_SF	<170..>229	CDD:302625	11/61 (18%)
		CLECT	247..354	CDD:153057	28/108 (26%)
clec-149	NP_497267.2	CLECT	197..306	CDD:153057	30/112 (27%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	54	1.000	Inparanoid score	I4072
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR22802
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	4.060