DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24Db and clec-78

DIOPT Version :9

Sequence 1:NP_652641.1 Gene:lectin-24Db / 53550 FlyBaseID:FBgn0040102 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_500454.2 Gene:clec-78 / 185915 WormBaseID:WBGene00018547 Length:3514 Species:Caenorhabditis elegans


Alignment Length:204 Identity:43/204 - (21%)
Similarity:72/204 - (35%) Gaps:65/204 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 QQKLLQETL---------------KKIPEDFERKLQKLEQNQKDELTKLGAQQSANQVTLKEIYT 231
            :::||:|.:               |..|   |.:|..:|....|:..:.|              |
 Worm    10 KRRLLKEVVLILLVAAVQPVLSSSKSTP---EAQLTDVELTCPDDWIRHG--------------T 57

  Fly   232 KVFWPKFERIGSRLFYINHKDAYDWQSAVDFCRDMGGYIAAIKDQEELDAISARL-------DDK 289
            |.:.|         |.|:.    .|..|:..|:..|..:|.|:...|...|::.|       :.|
 Worm    58 KCYLP---------FNIHQ----SWPFAMTTCQRYGSTLAKIQTGSENQFIASLLSKPGKPTEGK 109

  Fly   290 SYWLG--INDLQSSNTYV---SVASGREVEFLNWNAGEPNHGNEDENC----VELIRSKMNDDPC 345
            .||:|  :..|.....|:   ...:.|.|.|  |...:||..|  .:|    ||....:...|.|
 Worm   110 EYWIGLTVEVLDDDELYLWSDGTPTSRYVGF--WRQDQPNFLN--GSCALGKVERKDLEWRLDTC 170

  Fly   346 HRKKHVICQ 354
            :..:..:|:
 Worm   171 NLLRRFVCE 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24DbNP_652641.1 ExsD <44..>156 CDD:293411
NAT_SF <170..>229 CDD:302625 10/61 (16%)
CLECT 247..354 CDD:153057 28/122 (23%)
clec-78NP_500454.2 CLECT 48..179 CDD:214480 34/161 (21%)
LDLa 183..217 CDD:238060
CUB 234..333 CDD:214483
CUB 340..447 CDD:238001
CUB 460..562 CDD:214483
CCP 629..686 CDD:153056
CCP 690..746 CDD:153056
CCP 751..805 CDD:153056
EGF_CA 806..845 CDD:214542
FXa_inhibition 974..>1000 CDD:291342
CCP 1037..1092 CDD:153056
Sushi 1172..1232 CDD:278512
FA58C 1288..1428 CDD:238014
FA58C 1297..1429 CDD:214572
DUF5011 1455..1539 CDD:295940
HYR 1540..1621 CDD:280629
GCC2_GCC3 1862..1901 CDD:285001
GCC2_GCC3 1908..1958 CDD:285001
GCC2_GCC3 1965..2012 CDD:285001
EGF_CA 2091..2127 CDD:238011
EGF_CA 2131..2166 CDD:238011
EGF_CA 2169..2204 CDD:238011
EGF_CA 2244..2280 CDD:238011
EGF_CA 2283..2318 CDD:238011
EGF_CA 2320..2357 CDD:238011
EGF_CA 2362..2396 CDD:238011
EGF_CA <2406..2434 CDD:238011
EGF_CA 2511..2546 CDD:238011
LamG 2558..2713 CDD:304605
DUF5011 <2787..2843 CDD:295940
GCC2_GCC3 3081..3128 CDD:285001
GCC2_GCC3 3135..3182 CDD:285001
GCC2_GCC3 3193..3235 CDD:285001
GCC2_GCC3 3243..3290 CDD:285001
EGF_3 3296..3336 CDD:289699
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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