DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24Db and vcana

DIOPT Version :10

Sequence 1:NP_652641.1 Gene:lectin-24Db / 53550 FlyBaseID:FBgn0040102 Length:359 Species:Drosophila melanogaster
Sequence 2:XP_021331663.1 Gene:vcana / 116993 ZFINID:ZDB-GENE-011023-1 Length:8936 Species:Danio rerio


Alignment Length:457 Identity:91/457 - (19%)
Similarity:148/457 - (32%) Gaps:155/457 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 STENSRSVCLLKDPP---------NQCGEFCLSVLQPLLDHIVKHQEQWNTSE------ALWLNE 73
            :|||..||   ..||         :..||...:..:       ||......||      :..:||
Zfish  8392 NTENDASV---TSPPFSRTSGLGRSTSGEVTNTSSE-------KHTTSTTPSEVTDEPNSAAINE 8446

  Fly    74 T--QGKLDRIQTQLAAQALSLEESAQKVPGDIKDRLDRMEHLQTTLQESLKKMPAELDARLMKME 136
            .  |.:..|..|.||.|.            ||:.|.........:...|:.|..:|..:.:....
Zfish  8447 EKYQEEGGREDTTLAEQT------------DIRFRSTAQPQFDNSFTSSIVKSSSEEGSIINSSS 8499

  Fly   137 NQ------QKTLGDQL----ENQINL-TKESQQDQLEA---------LKNAMPI-NFEMRLAQIE 180
            .:      ..|.|..|    ||.:.: :||:..::.||         ||..:|| ..::..:.:.
Zfish  8500 GEVQAVILSTTTGSPLLLTPENDVKIVSKETSSEKQEAAGQIEEAVTLKTEIPIQEMDLMTSSVP 8564

  Fly   181 EQQKLLQETLKKIPED-FERKL-QKLEQNQKDELTKLGAQQSAN--------------------- 222
            ..|.....||.. ||| .|..| :....:.::|.|..||:..|.                     
Zfish  8565 TTQSETATTLAS-PEDVLEAALVESSPTSAQNETTTRGAKDVAYPMIAQTVEIPGVHSCSDAVCL 8628

  Fly   223 -------------------------QVTLKEIYT------------------------------- 231
                                     ::.:.|.:|                               
Zfish  8629 NGGTCIKTGGAQICICQPGYSGEQCEIDIDECHTNPCRNGGTCIDGLNSFTCLCLPSYAGALCEQ 8693

  Fly   232 -----KVFWPKFERIGSRLFYINHKDAYDWQSAVDFCRDMGGYIAAIKDQEELDAISARLDDKSY 291
                 ...|.||:  |....|..|:  .:|.:|...||..|.::|::...:|...|: ||.....
Zfish  8694 DTETCSYGWHKFQ--GHCYKYFPHR--RNWDTAERECRLQGAHLASVLSHDEQQYIN-RLGHDYQ 8753

  Fly   292 WLGINDLQSSNTYVSVASGREVEFLNWNAGEP-NHGNEDENCVELI---RSKMNDDPCHRKKHVI 352
            |:|:||....|.: ....||.|::.||...:| :..:..|:||.:|   ..:.||.||:......
Zfish  8754 WIGLNDKMFENDF-RWTDGRVVQYENWRPNQPDSFFSSGEDCVVMIWHEDGQWNDVPCNYHLTFT 8817

  Fly   353 CQ 354
            |:
Zfish  8818 CK 8819

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24DbNP_652641.1 IFT57 <64..215 CDD:463118 39/181 (22%)
CLECT 247..354 CDD:153057 31/110 (28%)
vcanaXP_021331663.1 Ig 31..149 CDD:472250
Ig strand B 40..44 CDD:409482
Ig strand C 66..70 CDD:409482
Ig strand E 110..114 CDD:409482
Ig strand F 124..129 CDD:409482
Ig strand G 142..145 CDD:409482
Link_domain_CSPGs_modules_1_3 147..241 CDD:239594
Link_domain_CSPGs_modules_2_4 249..343 CDD:239597
Herpes_BLLF1 <5897..>6290 CDD:282904
MSCRAMM_ClfA <8105..8452 CDD:468110 16/69 (23%)
EGF 8622..8652 CDD:394967 0/29 (0%)
EGF_CA 8656..8692 CDD:238011 2/35 (6%)
CLECT_CSPGs 8698..8821 CDD:153058 36/128 (28%)
CCP 8825..8881 CDD:153056
Blue background indicates that the domain is not in the aligned region.

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