DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-24Db and PRG3

DIOPT Version :9

Sequence 1:NP_652641.1 Gene:lectin-24Db / 53550 FlyBaseID:FBgn0040102 Length:359 Species:Drosophila melanogaster
Sequence 2:NP_006084.2 Gene:PRG3 / 10394 HGNCID:9363 Length:225 Species:Homo sapiens


Alignment Length:226 Identity:46/226 - (20%)
Similarity:83/226 - (36%) Gaps:60/226 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 ELDARLMKMENQQKTLGDQL------ENQINLTKESQQDQLEALK-NAMPINFEMRLAQIEEQQK 184
            |.||..::....|..||..|      |..:.||:|..|.:.|.:| :|...||        |.::
Human    21 ENDAPHLESLETQADLGQDLDSSKEQERDLALTEEVIQAEGEEVKASACQDNF--------EDEE 77

  Fly   185 LLQETLKKIPEDF----ERKLQKLEQNQKDELTKLGAQQSANQVTLKEIYTKVFWPKFERIGSRL 245
            .::.....:.:||    |..:.:::.:.:.::.:               |..|..||        
Human    78 AMESDPAALDKDFQCPREEDIVEVQGSPRCKICR---------------YLLVRTPK-------- 119

  Fly   246 FYINHKDAYDWQSAVDFC-RDMGGYIAAIKD---QEELDAISARLDDKSYWLGINDLQSSNTYVS 306
                     .:..|.:.| |..||.:.:|.|   ...:...::.::....|:|.| |:....:..
Human   120 ---------TFAEAQNVCSRCYGGNLVSIHDFNFNYRIQCCTSTVNQAQVWIGGN-LRGWFLWKR 174

  Fly   307 V--ASGREVEFLNWNAGEPNHGNEDENCVEL 335
            .  ..|....|..|:.|:|  ||...:||.|
Human   175 FCWTDGSHWNFAYWSPGQP--GNGQGSCVAL 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24DbNP_652641.1 ExsD <44..>156 CDD:293411 10/34 (29%)
NAT_SF <170..>229 CDD:302625 6/62 (10%)
CLECT 247..354 CDD:153057 21/95 (22%)
PRG3NP_006084.2 CLECT_EMBP_like 110..225 CDD:153068 25/129 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.