DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment lectin-24Db and clec3bb

DIOPT Version :9

Sequence 1:	NP_652641.1	Gene:	lectin-24Db / 53550	FlyBaseID:	FBgn0040102	Length:	359	Species:	Drosophila melanogaster
Sequence 2:	XP_003200569.1	Gene:	clec3bb / 100537161	ZFINID:	ZDB-GENE-111027-16	Length:	200	Species:	Danio rerio

Alignment Length:	184	Identity:	50/184 - (27%)
Similarity:	77/184 - (41%)	Gaps:	38/184 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly   191 KKIPE--DFERK----LQKLEQNQKD---ELTKLGAQQSANQVTLK--EIYTKVFWPKFERIGSR 244
            ||.|:  |.|.:    |:.|:|...|   ||..|..||:...|.||  :|:.|.|...
Zfish    31 KKTPDKKDSESRVSAALEDLQQQISDIVEELNLLKEQQALQTVCLKGTKIHGKCFLAD------- 88

  Fly   245 LFYINHKDAYDWQSAVDFCRDMGGYIAAIKDQEE--------LDAISARLDDKSYWLGINDLQSS 301
                :.|..|  .:|.:.|...||.:|......:        ..:|||   |...|||:||:|:.
Zfish    89 ----SMKKRY--HTANEDCIAKGGILATPLSSAQNTQLYEYMRQSISA---DAEIWLGVNDMQTE 144

  Fly   302 NTYVSVASGREVEFLNWNAGEPNHGNEDENCVELIR-SKMNDDPCHRKKHVICQ 354
            ..:.. .:|..:.:.||...:|: |...:||..|.. .|..|:.|..::..||:
Zfish   145 GLWTD-QTGSAIRYKNWKLPQPD-GGSAQNCAVLTSGGKWLDESCREERASICE 196

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
lectin-24Db	NP_652641.1	ExsD	<44..>156	CDD:293411
		NAT_SF	<170..>229	CDD:302625	17/48 (35%)
		CLECT	247..354	CDD:153057	29/115 (25%)
clec3bb	XP_003200569.1	CLECT	74..197	CDD:295302	35/141 (25%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910