DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-24Db and colec11

DIOPT Version :9

Sequence 1:NP_652641.1 Gene:lectin-24Db / 53550 FlyBaseID:FBgn0040102 Length:359 Species:Drosophila melanogaster
Sequence 2:XP_004914539.1 Gene:colec11 / 100493760 XenbaseID:XB-GENE-952506 Length:277 Species:Xenopus tropicalis


Alignment Length:137 Identity:37/137 - (27%)
Similarity:64/137 - (46%) Gaps:17/137 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 LKEIYTKVFWPKFERIGSRLFYINHKDAYDWQSAVDFCRDMGGYIAAIKDQEELDAISARLDD-- 288
            ::|..||:             |:..|:...:..|.|:|:..||.::..||:.....|::.::.  
 Frog   152 VRETDTKI-------------YLLVKEEKKYIDAQDYCQGRGGTLSMPKDETTNSLIASYINQAG 203

  Fly   289 -KSYWLGINDLQSSNTYVSVASGREVEFLNWNAGEPNHGNEDENCVELIRS-KMNDDPCHRKKHV 351
             ...::|||||:....:|.........|..|..||||:..::|:|.|::.| ..||..|....:.
 Frog   204 LSRVFIGINDLEREGHFVYSDRSPMQTFNKWRQGEPNNAYDEEDCAEMVSSGGWNDVSCLITMYF 268

  Fly   352 ICQTDKE 358
            ||:.|||
 Frog   269 ICEFDKE 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-24DbNP_652641.1 ExsD <44..>156 CDD:293411
NAT_SF <170..>229 CDD:302625 0/2 (0%)
CLECT 247..354 CDD:153057 30/110 (27%)
colec11XP_004914539.1 Collagen 50..99 CDD:189968
CLECT_collectin_like 158..272 CDD:153061 32/126 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9757
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm72280
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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