DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment lectin-24Db and LOC100363064

DIOPT Version :9

Sequence 1:	NP_652641.1	Gene:	lectin-24Db / 53550	FlyBaseID:	FBgn0040102	Length:	359	Species:	Drosophila melanogaster
Sequence 2:	XP_038945816.1	Gene:	LOC100363064 / 100363064	RGDID:	2324825	Length:	285	Species:	Rattus norvegicus

Alignment Length:	180	Identity:	40/180 - (22%)
Similarity:	78/180 - (43%)	Gaps:	36/180 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly   202 QKLEQNQKDELTKLGAQQSANQVTLKEIYTKVFWPKFERIGSRLFYINHKDA-------YDWQ-- 257
            |..:|.....|.|:...|......|::|      .:.::|..:|...|...|       :||:
  Rat   100 QTQDQKGSSSLGKVAVPQEQTHTGLEQI------QQIQQIQQQLTQFNASLAGLCRPCPWDWEFF 158

  Fly   258 ---------------SAVDFCRDMGGY---IAAIKDQEELDAISARLDDKSYWLGINDLQSSNTY 304
                           ::...|:|:|.:   |.::.:|..:...:.|.:.:| |:|::|.....::
  Rat   159 QGSCYLFSRTLASWGASASSCKDLGAHLVIINSVAEQRFMKYWNVRKNQRS-WIGLSDHLREGSW 222

  Fly   305 VSVASGREVEFLNWNAGEPNHGNEDENCVELIRSKMNDDPCHRKKHVICQ 354
            ..| ....::|..|..||||: :.||:||||...:.||:.|.::...:|:
  Rat   223 QWV-DHSPLKFSFWKEGEPNN-DGDEDCVELFMDEWNDNTCTQQNFWVCE 270

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
lectin-24Db	NP_652641.1	ExsD	<44..>156	CDD:293411
		NAT_SF	<170..>229	CDD:302625	6/26 (23%)
		CLECT	247..354	CDD:153057	30/133 (23%)
LOC100363064	XP_038945816.1	CLECT_DC-SIGN_like	151..270	CDD:153060	28/121 (23%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR22802
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100