DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-29Ca and SFTPD

DIOPT Version :9

Sequence 1:NP_652640.1 Gene:lectin-29Ca / 53547 FlyBaseID:FBgn0040098 Length:236 Species:Drosophila melanogaster
Sequence 2:NP_003010.4 Gene:SFTPD / 6441 HGNCID:10803 Length:375 Species:Homo sapiens


Alignment Length:153 Identity:31/153 - (20%)
Similarity:58/153 - (37%) Gaps:18/153 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 ALKQQIEPYMENVK-----MSNKIKMSVF---KKIGSRHFYLEKQKKMPWDSAYDTCRQMGGHLA 149
            :|:||:|.....|:     .|...|:.:|   :.:|.:.|......| |:..|...|.|.||.||
Human   226 SLRQQVEALQGQVQHLQAAFSQYKKVELFPNGQSVGEKIFKTAGFVK-PFTEAQLLCTQAGGQLA 289

  Fly   150 ---NILDEKELNEIFSEETKKKYWVDINSRANDGASWISTLSGRDVPFLKWKPNLATNI--HNHC 209
               :..:...|.::...:.:..: :.:.....:|.....|  |..:.:..|.|....:.  ...|
Human   290 SPRSAAENAALQQLVVAKNEAAF-LSMTDSKTEGKFTYPT--GESLVYSNWAPGEPNDDGGSEDC 351

  Fly   210 VYINSNEMYFEN-CANDNYFACQ 231
            |.|.:|..:.:. |.......|:
Human   352 VEIFTNGKWNDRACGEKRLVVCE 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-29CaNP_652640.1 CLECT 131..231 CDD:153057 20/105 (19%)
SFTPDNP_003010.4 Collagen 46..98 CDD:189968
Collagen 130..201 CDD:189968
Surfac_D-trimer 224..269 CDD:286141 10/42 (24%)
CLECT_collectin_like 262..375 CDD:153061 22/117 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 49 1.000 Domainoid score I11773
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

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